FastQCFastQC Report
Sun 21 May 2023
EGAF00007833203

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007833203
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences116098
Sequences flagged as poor quality0
Sequence length247-250
%GC52

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATC5253345.24884149597754No Hit
GGAAGTAAAAGTCGTAACAAGGAACGAAGATGAAGGACACCTCTCCGGCA3108926.778239073885857No Hit
GGAAGTAAAAGTCGTAACAAGGACATTCAAAAGGGGAGCGCGCGGAAGTG60065.173215731537149No Hit
GGAAGTAAAAGTCGTAACAAGGCATCGAAGGTTTGGTACACGTTTCCGAA41833.6029905769263895No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCTGTAGGTGAACCTGCAGAAGGATC24882.1430171062378336No Hit
GGAAGTAAAAGTCGTAACAAGGTCTCCGTAGGTGAACCTGCGGAGGGATC23752.045685541525263No Hit
GGAAGTAAAAGTCGTAACAAGGTCTCCGTTGGTGAACCAGCGGAGGGATC20011.7235439025650743No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTAGGGGAACCTGCGGCTGGATC15351.3221588657858017No Hit
GGAAGTAAAAGTCGTAACAAGGTATCGAAGGTTTGGTACACGTTTCCGAA5010.43153198160175027No Hit
GGAAGTAAAAGTCGTAACAAGGAGGATCTTAGCACATGCACATAGAAACA4650.4005236954986305No Hit
GGAAGTAAAAGTCGTAACAAGGTATCAGTAGGTGAACCTGCTGATGGATC4360.3755447983600062No Hit
GGAAGTAAAAGTCGTAACAAGGAAGGAGCATATATGATTCAGCAGGAAAC4080.3514272425020241No Hit
GGAAGTAAAAGTCGTAACAAGGAACGAAGATGAAGGACACCTCTCCGGCG4060.34970455994073973No Hit
GGAAGTAAAAGTCGTAACAAGGCTCAAGTTGAAAAACGCTTGAACCAAGT3850.3316163930472532No Hit
GGAAGTAAAAGTCGTAACAAGGTATCCGTACGGGAACGTGCGGATGGATC3480.2997467656634912No Hit
GGAAGTAAAAGTCGTAACAAGGAATCATCATGCAGTGAGGAAGGATCATG3070.2644317731571603No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTACCGGAAGGTGCGGCTGGATC3060.26357043187651813No Hit
GGAAGTAAAAGTCGTAACAAGGAGCTGTTGAAAAAGCTGGTAATTGTCAT2640.22739409808954503No Hit
GGAAGTAAAAGTCGTAACAAGGGCTGGCAGGGGCTGTGGGAGGAGTTTGT2620.22567141552826062No Hit
GGAAGTAAAAGTCGTAACAAGGAAAACAGTGAACAGCCTCAGTTCCCTGG2300.19810849454770968No Hit
GGAAGTAAAAGTCGTAACAACACTAAATCTTATCTCCAGCCCTCAGAAGG2260.19466312942514083No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTTCGGAAGGATC2230.1920791055832142No Hit
GGAAGTAAAAGTCGTAACAAGGAAAGAAAACAGAATCCGAAAAGAGCACA2070.17829764509293872No Hit
GGAAGTAAAAGTCGTAACAAGGAAAAGTGGGATAGTTTCTTCTTTGGAGA2060.1774363038122965No Hit
GGAAGTAAAAGTCGTAACAAGGTAACCAGGTGTACCTGCGGAAGGATCAT2030.17485227997036987No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGTTGAACCTGCGGAAGGATC1880.16193216076073663No Hit
GGAAGTAAAAGTCGTAACAAGGCAGGGTGGGAGGAGGTGCCAGGAATTTG1830.15762545435752554No Hit
GGAAGTAAAAGTCGTAACAAGGAACGAAGATGAAGGACACCTCTCCGGAA1800.1550414305155989No Hit
GGAAGTAAAAGTCGTAACAAGGATGCGACTGAATAACGTGGTCGATTAAC1790.15418008923495666No Hit
GGAAGTAAAAGTCGTAACAAGGGATAACACATGGCTCAAGCAGAGCAAAA1770.15245740667367225No Hit
GGAAGTAAAAGTCGTAACAAGAGCAGAAGGAATTCAGAAGAGCCAGGGTG1640.14125997002532342No Hit
GGAAGTAAAAGTCGTAACAAGGAAAGGCAGTCGGGGTAACAGTGCCCAGA1620.139537287464039No Hit
GGAAGTAAAAGTCGTAACAAGGTAGTGATGGACAAACCGGCGAAAAAGAC1590.13695326362211235No Hit
GGAAGTAAAAGTCGTAACAAGGCACGGCGCAAGAGCGGAGAAATACGGCC1470.12661716825440578No Hit
GGAAGTAAAAGTCGTAACAAGGGCGATAACGGAATTGAACTGATTAAGAA1370.11800375544798361No Hit
GGAAGTAAAAGTCGTAACAAGGAAGCTGAGTTTCGCCTCCCAGGCCCAGC1300.11197436648348807No Hit
GGAAGTAAAAGTCGTAACAAGGCAGAGGAGAGAGTGAGGGGAGGAGGAAG1290.11111302520284587No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)