FastQCFastQC Report
Sun 21 May 2023
EGAF00007833206

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007833206
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences105851
Sequences flagged as poor quality0
Sequence length237-238
%GC58

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG2992528.270871319118385No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGGGCAAACT2041419.28559956920577No Hit
GCTGCGTTCTTCATCGATGCCAGGCAAACAAAGGAACAACACACACGTGT92948.78026660116579No Hit
GCTGCGTTCTTCATCGATGCGGACATCTCCGTACTTCTCACGTGCCTGGT85858.110457152034463No Hit
GCTGCGTTCTTCATCGATGCGTTTTTGTTCTCTGTTTTTTTCTTTACGCT48084.542233894814409No Hit
GCTGCGTTCTTCATCGATAAAGTCGAGAGAAATTTGCTCCTGTCCGAGGT27312.5800417568091No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT22792.153026423935532No Hit
GCTGCGTTCTTCATCGATGGGAGAACCAAGAGATCCGTTGTCGAAAGTTG19561.8478805112847305No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCGTTGTTGAAAGTTT18981.7930865083938745No Hit
GCTGCGTTCTTCATCGATGCTGTCGTGGTGACGGTGGCCGCGGCGCTGGG16491.557850185638303No Hit
GCTGCGTTCTTCATCGAAACGGATATAACTACCATCTTTTCTTCTGGTCT10821.0221915711707967No Hit
GCTGCGTTCTTCATCGATGCTGTTTAATTTTTCAAGAACGAGTTCGTAAT10490.9910156729742752No Hit
GCTGCGTTCTTCATCGATGCCGTTTCCGAGGCCGGACGATCGGGCAAACT9210.8700909769392825No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCATTGTTGAAAGTTT8790.8304125610528006No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATCAAAATAA6920.6537491379391787No Hit
GCTGCGTTCTTCATCGATGCCAGGCAAACAAAGGAACAACACACATGTGT5790.5469953047207867No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG5520.5214877516509054No Hit
GCTGCGTTCTTCATCGATGCGCAAGGATAAGAACACGCTTACCCCTGCGA5180.48936712926661063No Hit
GCTGCGTTCTTCATCGATGCGAACGTCACCATACTTCTCACGTGCTTGGT5030.4751962664500099No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAAGCCGGACGATCGGGCAAACT4370.41284447005696684No Hit
GCTGCGTTCTTCATCGACTCTTACTACCTAGGCATCCTTTGTGTGCCCTT4140.39111581373817916No Hit
GCTGCGTTCTTCATCGATGTGCGAGCCTAGACATCCACTGCTGAAAGTTG3660.3457690527250569No Hit
GCTGCGTTCTTCATCGGCGCAGTCCTTGTCATTTACTACAAACAAATTTC3650.3448243285372835No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT3540.3344323624717764No Hit
GCTGCGTTCTTCATCGATGCGTTTTTGTTCTCTGCTTTTTTCTTTACGCT3050.2881408772708808No Hit
GCTGCGTTCTTCATCGATGCGTTTTTGTTCTCTGCTTTTTTCTTTACGGT2850.2692463935154132No Hit
GCTGCGTTCTTCATCGATGCCGAGCATGCTTTTGACCCGATTTACGCCCG2740.258854427449906No Hit
GCTGCGTTCTTCATCGATGCGCCCTCAAAACTAGACAATGCAAAACTTGG2710.25602025488658586No Hit
GCTGCGTTCTTCATCGATGCAGTAAGACCGTAGCTGCGTTCTTCATCGAT2480.23429159856779813No Hit
GCTGCGTTCTTCATCGATGCTAGGTTTTTTACTTCTTCTTTTGCTTCAGC2270.21445239062455718No Hit
GCTGCGTTCTTCATCGATGCGGACATCACCATACTTCTCACGTGCCTGGT2170.20500514874682335No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCTTTGCCGAGAGTCG2120.2002815278079565No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGCTGAAAGTTT1890.17855287148916874No Hit
GCTGCGTTCTTCATCGATTTCACCCAACAATGCTTCAGGAGAAACGACAA1740.16438200867256805No Hit
GCTGCGTTCTTCATCGATGCTGTCCATGGTCACGCGATGCTCTCCTCGAT1710.16154783610924792No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGGTCAAACT1670.1577689393581544No Hit
GCTGCGTTCTTCATCGATGCCAAATATACCGCCGTATCTATACTCCCCCC1590.15021114585596734No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCTGACGATCGGGCAAACT1500.14170862816600693No Hit
GCTGCGTTCTTCATCGATGCCAGGCAAACAAAGGAACAACACATGCGTGT1410.13320611047604652No Hit
GCTGCGTTCTTCATCGTTTCGAAACGCCTAGGCATCCGCCGTATGCCCTT1400.13226138628827314No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCT1270.1199799718472192No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTG1240.11714579928389907No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTAAAAGTTT1170.11053272996948542No Hit
GCTGCGTTCTTCATCGATGCGGATGAAATGCATGCCGGAATCTTTGAAAG1120.10580910903061852No Hit
GCTGCGTTCTTCATCGATGAAGTCGAGAGAAATTTGTTCTTGTCCGAGGT1110.10486438484284513No Hit
GCTGCGTTCTTCATCGATGCGCCTTGAGGTTGTCCATCGTCATCATGGCA1100.10391966065507174No Hit
GCTGCGTTCTTCATCGATGCTAGGCTTTTTACTTCTTCTTTTGCTTCAGC1100.10391966065507174No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)