FastQCFastQC Report
Sun 21 May 2023
EGAF00007833208

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007833208
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences82288
Sequences flagged as poor quality0
Sequence length237-238
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGCAGGTATCGAGCATGCCCTCAAGGCCTTCGA1956723.778679758895585No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT1883522.88912113552401No Hit
GCTGCGTTCTTCATCGATGCCAGTTGGCGCGTAAACACCGTGATGTCTTC1093313.286262881586621No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG53406.489403072136884No Hit
GCTGCGTTCTTCATCGATAAAGTCGAGAGAAATTTGCTCCTGTCCGAGGT36364.41862726035388No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG31703.852323546568151No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTAAAAGTTT25823.1377600622204938No Hit
GCTGCGTTCTTCATCGATGCTGTTTAATTTTTCAAGAACGAGTTCGTAAT18792.283443515457904No Hit
GCTGCGTTCTTCATCGATGGGAGAACCAAGAGATCCGTTGTCGAAAGTTG17112.079282519930002No Hit
GCTGCGTTCTTCATCGATGCACCTTTCAATCTTAAATACTACAAAAAGGG11411.3865934279603345No Hit
GCTGCGTTCTTCATCGATGCAGCTGTCGGTAAGCTGCGTTCTTCATCGAT9931.2067373128524208No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCATTGTTGAAAGTTT9571.1629885280964418No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT6860.8336573984055998No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCGTTGTTGAAAGTTT4930.5991153023527125No Hit
GCTGCGTTCTTCATCGATGCGTTTTTGTTCTCTGTTTTTTTCTTTACGCT3200.38887808671981333No Hit
GCTGCGTTCTTCATCGATAAAGTCGAGAGAAATTTGCGCCTGTCCGAGGT3020.36700369434182384No Hit
GCTGCGTTCTTCATCGACTCTTACTACCTAGGCATCCTTTGTGTGCCCTT2480.3013805172078553No Hit
GCTGCGTTCTTCATCGATGCCCCTTCCTTCCCATGCCTTAGCTTCCTCCT2110.25641648843087694No Hit
GCTGCGTTCTTCATCGACGACAGTCTCGACTATCTCGAGCGAATCGACGA1880.22846587594789036No Hit
GCTGCGTTCTTCATCGATGCGTTTTTGTTCTCTGCTTTTTTCTTTACGGT1650.20051526346490373No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATCAAAATAA1580.19200855531790784No Hit
GCTGCGTTCTTCATCGATGCAGGTATCGAGCATTCCCTCAAGGCCTTCGA1570.19079331129690844No Hit
GCTGCGTTCTTCATCGAAGAAAGGCACTGGTAGGCCTAAGTGGACTTGAA1450.17621038304491543No Hit
GCTGCGTTCTTCATCGATGCCAGTTGGCGCGTAAACACTGTGATGTCTTC1430.17377989500291657No Hit
GCTGCGTTCTTCATCGATGCCATCCGCGACGAATAAGTCCACTGCTGCCG1250.15190550262492708No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGATATCCGTTGTTAAGAGTCG1250.15190550262492708No Hit
GCTGCGTTCTTCATCGATGCAGGTATCGAGCATGCCCTCAAGGCCTTCTA1230.14947501458292825No Hit
GCTGCGTTCTTCATCGATGAGCTGTCGGTAAGCTGCGTTCTTCATCGATG1180.14339879447793116No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAATCGTACTCCACAACAGG1160.14096830643593233No Hit
GCTGCGTTCTTCATCGATGCAGGTATCGAGCATGCCCTCAAGTCCTTCGA1140.1385378183939335No Hit
GCTGCGTTCTTCATCGATGCCTTTGCCGAAGACGAACCGTGGCGGGCCGT1130.13732257437293408No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTG1120.13610733035193467No Hit
GCTGCGTTCTTCATCGATACGAGAACCAAGAGATCCATTGTTAAAAGTTT1010.12273964612094108No Hit
GCTGCGTTCTTCATCGATGCTACCCTTATCTGCAGCAGCTGGAATCTCTG960.116663426015944No Hit
GCTGCGTTCTTCATCGATGCAGCTGTCGGTAAGCTGCGTTCTTCATCGGC940.11423293797394518No Hit
GCTGCGTTCTTCATCGATGCAGGTATCGATCATGCCCTCAAGGCCTTCGA930.11301769395294575No Hit
GCTGCGTTCTTCATCGAAACGGATATAACTACCATCTTTTCTTCTGGTCT920.11180244993194634No Hit
GCTGCGTTCTTCATCGATGCGTTTTTGTTCTCTGCTTTTTTCTTTACGCT910.11058720591094692No Hit
GCTGCGTTCTTCATCGATGCGACGTTCTAAGGTTGTATCGCGCTCCTGAG860.10451098580594982No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)