FastQCFastQC Report
Sun 21 May 2023
EGAF00007833211

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007833211
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences110436
Sequences flagged as poor quality0
Sequence length247-250
%GC56

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATC5255347.586837625412No Hit
GGAAGTAAAAGTCGTAACAAGGATGTTGCGTCAAGTTTTCAAAATAGGGT1105110.00670071353544No Hit
GGAAGTAAAAGTCGTAACAAGGAACGAAGATGAAGGACACCTCTCCGGCA104219.436234561193814No Hit
GGAAGTAAAAGTCGTAACAAGGACATTCAAAAGGGGAGCGCGCGGAAGTG92528.377702922959903No Hit
GGAAGTAAAAGTCGTAACAAGGGAGGGTGTGGTGTTCCAAGCAAGGCAGG84067.611648375529718No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTACCGGAAGGTGCGGCTGGATC25472.3063131587525807No Hit
GGAAGTAAAAGTCGTAACAAGGATGTTGCGTCAAGGTTTCGGATAAAGCA11801.0684921583541598No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTATCGGAAGGTGCGGCTGGATC8550.7742040638922091No Hit
GGAAGTAAAAGTCGTAACAAGGTATCCGTACGGGAACGTGCGGATGGATC7720.6990474120757724No Hit
GGAAGTAAAAGTCGTAACAAGGTCTCCGTTGGTGAACCAGCGGAGGGATC5330.48263247491759936No Hit
GGAAGTAAAAGTCGTAACAAGGCCCACCAAATCGGGATATCGGCACTTAC5330.48263247491759936No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTAGGGGAACCTGCGGCTGGATC5320.4817269730884856No Hit
GGAAGTAAAAGTCGTAACAAGGGCTGGCAGGGGCTGTGGGAGGAGTTTGT4800.4346408779745735No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGTATC3860.3495237060378862No Hit
GGAAGTAAAAGTCGTAACAAGGAGGAAGTAGGCCAAGTTGAGCAGGATAT3380.3060596182404288No Hit
GGAAGTAAAAGTCGTAACAAGGTTCCAGACCGAAGAGATAAAGCTGCGAT3250.2942880944619508No Hit
GGAAGTAAAAGTCGTAACAAGGCTATTGGTGGGTGCAGATGAAAGCTGTG2860.2589735231265167No Hit
GGAAGTAAAAGTCGTAACAAGGTATCCGTAGGTGAACCTGCGGAAGGATC2670.24176898837335653No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAAACTGCGGAAGGATC2620.23724147922778802No Hit
GGAAGTAAAAGTCGTAACAAGGAACGAAGATGAAGGACACCTCTCCGGAA2440.22094244630374155No Hit
GGAAGTAAAAGTCGTAACAAGGTCTCCGTAGGTGAACCTGCGGAGGGATC2210.20011590423412656No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGTGGAAGGATC1850.16751783838603354No Hit
GGAAGTAAAAGTCGTAACAAGGGCTGCCAGCGCAACAATAATCATCACAT1840.16661233655691984No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTTCGGAAGGATC1710.1548408127784418No Hit
GGAAGTAAAAGTCGTAACAAGGAACGAAGATGAAGGACACCTATCCGGCA1690.1530298091202144No Hit
GGAAGTAAAAGTCGTAACAAGGAGGTGGGGGCGGGAACCCCCGGGCGCCT1590.14397479082907746No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCCGTATGTGAACCTGCGGAAGGATC1520.1376362780252816No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCTGTAGGTGAACCTGCGGAAGGATC1460.13220326705059943No Hit
GGAAGTAAAAGTCGTAACAAGGGGAGGTGTGGTGTTCCAAGCAAGGCAGG1400.12677025607591727No Hit
GGAAGTAAAAGTCGTAACAAGGATAATGCATTCAAGACATCCAGCCGATA1370.1240537505885762No Hit
GGAAGTAAAAGTCGTAACAAGGCATCGGCATGAAACTCACCGAAAGCTAC1360.1231482487594625No Hit
GGAAGTAAAAGTCGTAACAAGGAACGAAGATGAAGGACACCTCTACGGCA1340.1213372451012351No Hit
GGAAGTAAAAGTCGTAACAAGGACATTCAAAAGGGGAGAGCGCGGAAGTG1310.11862073961389401No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGTTGAACCTGCGGAAGGATC1300.11771523778478032No Hit
GGAAGTAAAAGTCGTAACAAGGGCGGGTGTGGTGTTCCAAGCAAGGCAGG1270.11499873229743923No Hit
GGAAGTAAAAGTCGTAACAAGGAAGGAGCATATATGATTCAGCAGGAAAC1240.11228222681009817No Hit
GGAAGTAAAAGTCGTAACAAGGACTACAGAAAGAAACAGGGTCACAGACA1210.10956572132275706No Hit
GGAAGTAAAAGTCGTAACAAGGAGGGGATCGTCGGCGGGTGCGGCCTTTC1200.10866021949364338No Hit
GGAAGTAAAAGTCGTAACAAGGTATCCGTACGGGAACGTGCGGAAGGATC1170.10594371400630229No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTACCGGAAGTTGCGGCTGGATC1160.1050382121771886No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACATGCGGAAGGATC1120.10141620486073381No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)