FastQCFastQC Report
Sun 21 May 2023
EGAF00007833220

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007833220
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences75612
Sequences flagged as poor quality0
Sequence length236-238
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGCCGTTTCCGAGGCCGGACGATCGGGCAAACT4122454.520446489975136No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATCAAAATAA855411.313019097497753No Hit
GCTGCGTTCTTCATCGATGCCGCCAGGCAGACCTACGAATACGCCGAAGT22512.9770406813733272No Hit
GCTGCGTTCTTCATCGACGACAGTCTCGACTATCTCGAGCGAATCGACGA21782.8804951594984924No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGGGCAAACT18912.500925778976882No Hit
GCTGCGTTCTTCATCGATAAAGTCGAGAGAAATTTGCGCCTGTCCGAGGT15992.114743691477543No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAAGCCGGACGATCGGGCAAACT15402.036713749140348No Hit
GCTGCGTTCTTCATCGATGCCATCTGGCCATGGTTGAGGAGGGTGGGAGC14131.8687509919060468No Hit
GCTGCGTTCTTCATCGATGCTGTTTAATTTTTCAAGAACGAGTTCGTAAT13601.7986562979421257No Hit
GCTGCGTTCTTCATCGATGCTTTTCAGTGCGTGCCCTTCGCACATCTGCG7731.0223244987568112No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG6930.9165211871131566No Hit
GCTGCGTTCTTCATCGATGCGTTTTTGTTCTCTGTTTTTTTCTTTACGCT6770.8953605247844257No Hit
GCTGCGTTCTTCATCGACTCTTACTACCTAGGCATCCTTTGTGTGCCCTT4660.6163042903242871No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG4450.5885309210178279No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT3790.501243188911813No Hit
GCTGCGTTCTTCATCGATGAGTGACTGTTGGGCCCCACTGCTGCGACTCT3720.4919853991429932No Hit
GCTGCGTTCTTCATCGATGCGTAGACAGACGAAGCACAGCCAAGTAGCAG3210.42453578797016345No Hit
GCTGCGTTCTTCATCGATGCGTTTTTGTTCTCTGTTTTTTTCTTTACGCC3060.4046976670369783No Hit
GCTGCGTTCTTCATCGATGCCGGTAACGTCTGGCTCCTTCGTCCCGATGC2490.3293128074908745No Hit
GCTGCGTTCTTCATCGATAAAGTCGAGAGAAATTTGCTCCTGTCCGAGGT2290.30286197957996086No Hit
GCTGCGTTCTTCATCGATGCTGTCCATGGTCACGCGATGCTCTCCTCGAT1870.24731524096704227No Hit
GCTGCGTTCTTCATCGAAACGGATATAACTACCATCTTTTCTTCTGGTCT1810.2393799925937682No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCGTTGTTGAAAGTTT1660.21954187166058295No Hit
GCTGCGTTCTTCATCGATGCCAAATATACCGCCGTATCTATACTCCCCCC1530.20234883351848915No Hit
GCTGCGTTCTTCATCGATGCCAGTTGGCGGGTGAATACTGTAATGTCTTC1500.1983812093318521No Hit
GCTGCGTTCTTCATCGATGCGGGGCTCTCTACCCTCGCTCAGCGCACCAG1370.18118817118975825No Hit
GCTGCGTTCTTCATCGATGACAGTCTCGACTATCTCGAGCGAATCGACGA1350.17854308839866687No Hit
GCTGCGTTCTTCATCGATGCCAAATACTTACGGCGCAGACAGGACACCCA1260.16664021583875577No Hit
GCTGCGTTCTTCATCGATGCCAGCGCTGCGGGGTCGGGGATATCGGCGAG1240.1639951330476644No Hit
GCTGCGTTCTTCATCGATGCAACTGTCGAAAAAATCAAACGGAGAGAATT1230.16267259165211873No Hit
GCTGCGTTCTTCATCGATGCGGTCAATTTGACCAATAAGGCGTAAATAAC1230.16267259165211873No Hit
GCTGCGTTCTTCATCGATGCTGGCTCCAGGGAGCTTCTTGATGAGGTCAG1080.14283447071893351No Hit
GCTGCGTTCTTCATCGATGCCGAAGATCATGACCTCGGGCTAAGACGCCT1030.13622176374120512No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT920.12167380839020261No Hit
GCTGCGTTCTTCATCGATGCGTTTTTGTTCTCTGCTTTTTTCTTTACGCT900.11902872559911126No Hit
GCTGCGTTCTTCATCGATGCCGTTTCCGAGGCCGGACGATCGGACAAACT860.11373856001692853No Hit
GCTGCGTTCTTCATCGATGTCGTTTCCGAGGCCGGACGATCGGGCAAACT860.11373856001692853No Hit
GCTGCGTTCTTCATCGATTCCGTTTCCGAGGCCGGACGATCGGGCAAACT860.11373856001692853No Hit
GCTGCGTTCTTCATCGATGCCGTTTCCGAGGCCGGACGATCGTGCAAACT840.11109347722583716No Hit
TCTGCGTTCTTCATCGATGCCGTTTCCGAGGCCGGACGATCGGGCAAACT840.11109347722583716No Hit
GCTGCGTTCTTCATCGATGCCGGTAACGTCTGGCTCATTCGTCCCGATGC790.10448077024810877No Hit
GCTGCGTTCTTCATCGATGCCGTTTCCGATGCCGGACGATCGGGCAAACT780.10315822885256308No Hit
GCTGCGTTCTTCATCGATGCGCCCAAACTGCACCTCAGTACCCTGCAAGA770.1018356874570174No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)