FastQCFastQC Report
Sun 21 May 2023
EGAF00007833231

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007833231
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences82001
Sequences flagged as poor quality0
Sequence length247-250
%GC57

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATC3283140.037316618090024No Hit
GGAAGTAAAAGTCGTAACAAGGGCTGGCAGGGGCTGTGGGAGGAGTTTGT1656420.19975366154071No Hit
GGAAGTAAAAGTCGTAACAAGGACATTCAAAAGGGGAGCGCGCGGAAGTG81149.895001280472188No Hit
GGAAGTAAAAGTCGTAACAAGGATGTTGCGTCAAGGTTTCGGATAAAGCA72778.874282020950965No Hit
GGAAGTAAAAGTCGTAACAAGGGGGCAGGGCTTCGACCTTCATGCCGCGT15291.8646114071779611No Hit
GGAAGTAAAAGTCGTAACAACACTAAATCTTATCTCCAGCCCTCAGAAGG14071.7158327337471493No Hit
GGAAGTAAAAGTCGTAACAAGGAACGAAGATGAAGGACACCTCTCCGGCA8451.0304752381068525No Hit
GGAAGTAAAAGTCGTAACAAGGCAAGAGAAACACGTCAAAGGCCTAAGAA7520.9170619870489385No Hit
GGAAGTAAAAGTCGTAACAAGGAAGAATAAGGACAGATCCATTAGGAGGC5640.6877964902867039No Hit
GGAAGTAAAAGTCGTAACAAGGGCCAGCCAGGGAGAGGTCTCCCCAGGCC4680.5707247472591798No Hit
GGAAGTAAAAGTCGTAACAAGGTCTCCGTTGGTGAACCAGCGGAGGGATC4500.548773795441519No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTACCGGAAGGTGCGGCTGGATC4190.5109693784222145No Hit
GGAAGTAAAAGTCGTAACAAGAGCAGAAGGAATTCAGAAGAGCCAGGGTG3190.38901964610187684No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTAGGGGAACCTGCGGCTGGATC3090.37682467286984306No Hit
GGAAGTAAAAGTCGTAACAACAGGAGAGCGTCAGCCAATCGCCGCAATCG2950.3597517103449958No Hit
GGAAGTAAAAGTCGTAACAAGGAGGAGGTGGCGTCTCTGAGGGCAAAGCT2540.3097523200936574No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCTAGACGCAGCACGCGCAAGTCGT2380.2902403629224034No Hit
GGAAGTAAAAGTCGTAACAAGGCAGGGTGGGAGGAGGTGCCAGGAATTTG2300.28048438433677636No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGTGGAAGGATC2270.27682589236716626No Hit
GGAAGTAAAAGTCGTAACAAGGATGTTGCGTCAAGTTTTCAAAATAGGGT2270.27682589236716626No Hit
GGAAGTAAAAGTCGTAACAAGGAGAAACACGATGAGCCTAGATGCAGCGT2240.2731674003975561No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCTAGACGCAGCACGCGCAGTCGTA2160.2634114218119291No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCCATAGGTGAACCTGCGGAAGGATC2150.26219192448872575No Hit
GGAAGTAAAAGTCGTAACAAGGAAATGCGGATCCTCATGTTGGGCCTGGA2030.24755795661028523No Hit
GGAAGTAAAAGTCGTAACAAGGAAAGGCAGTCGGGGTACCAGTGCCCAGA2000.24389946464067508No Hit
GGAAGTAAAAGTCGTAACAAGGAAAACAGTGAACAGCCTCAGTTCCCTGG1990.2426799673174717No Hit
GGAAGTAAAAGTCGTAACAAGGCGCGATTTTGCGCGAAGGCATGAACGTC1970.24024097267106498No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTATCGGAAGGTGCGGCTGGATC1900.23170449140864136No Hit
GGAAGTAAAAGTCGTAACAAGGTAACCTAGACGCAGCACGCGCAAGTCGT1840.2243875074694211No Hit
GGAAGTAAAAGTCGTAACAAGGAAAGAAGCTGGCATCTCAACAATGACGG1660.20243655565176036No Hit
GGAAGTAAAAGTCGTAACAAGGTCTCCGTAGGTGAACCTGCGGAGGGATC1610.19633906903574347No Hit
GGAAGTAAAAGTCGTAACAAGGAAAGAAAACAGAATCCGAAAAGAGCACA1560.1902415824197266No Hit
GGAAGTAAAAGTCGTAACAAGGTAACTTAGACGCAGCACGCGCAAGTCGT1560.1902415824197266No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCTGAAGGATC1470.17926610651089622No Hit
GGAAGTAAAAGTCGTAACAAGGTGGGTAAGGAGCTCCTGGACGCGCTCCC1350.1646321386324557No Hit
GGAAGTAAAAGTCGTAACAAGGATGGAAAGAGGTGGGGGAGGAGAAGAGG1290.15731515469323545No Hit
GGAAGTAAAAGTCGTAACAAGGTAACTTAGACGCAGCACGCGCGAGCCAT1290.15731515469323545No Hit
GGAAGTAAAAGTCGTAACAAGGCAAGAGCAAAACCAGAAAACGCAATCAT1260.15365666272362533No Hit
GGAAGTAAAAGTCGTAACAAGGAAAGGAAACAGAATCCGAAAAAAGCACA1230.1499981707540152No Hit
GGAAGTAAAAGTCGTAACAAGGACTACAGAAAGAAACAGGGTCACAGACA1210.14755917610760844No Hit
GGAAGTAAAAGTCGTAACAAGGAAAAGTGGGATAGTTTCTTCTTTGGAGA1200.14633967878440507No Hit
GGAAGTAAAAGTCGTAACAAGGATGTTGCGTTAAGGTTTCGGATAAAGCA1090.13292520822916792No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCTAGACGCAGCACGCGCGTAACAA1080.13170571090596456No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCTTAGACGCAGCACGCGCAGTCGTA980.1195107376739308No Hit
GGAAGTAAAAGTCGTAACAAGGTATCCGTACGGGAACGTGCGGATGGATC970.11829124035072744No Hit
GGAAGTAAAAGTCGTAACAAGGGCAGAAGGAATTCAGAAGAGCCAGGGTG870.10609626711869367No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)