FastQCFastQC Report
Sun 21 May 2023
EGAF00007833233

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007833233
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences155096
Sequences flagged as poor quality0
Sequence length247-250
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATC5905538.07641718677464No Hit
GGAAGTAAAAGTCGTAACAAGGAACGAAGATGAAGGACACCTCTCCGGCA2232814.396244906380565No Hit
GGAAGTAAAAGTCGTAACAAGGACATTCAAAAGGGGAGCGCGCGGAAGTG1828511.78947232681694No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTATCGGAAGGTGCGGCTGGATC125498.091117759323257No Hit
GGAAGTAAAAGTCGTAACAAGGTATCCGTACGGGAACGTGCGGATGGATC50303.243152628049724No Hit
GGAAGTAAAAGTCGTAACAAGGCATCGATGAAGAACGCAGCTCGTCTGAC35122.264403982049827No Hit
GGAAGTAAAAGTCGTAACAAGGTCTCCGTAGGTGAACCTGCGGAGGGATC29751.9181668128127094No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTACCGGAAGGTGCGGCTGGATC27221.7550420384793934No Hit
GGAAGTAAAAGTCGTAACAAGGTCTCCGTTGGTGAACCAGCGGAGGGATC25171.622865837932635No Hit
GGAAGTAAAAGTCGTAACAAGGTAGAGAAAATGAAGAAATAAAGGTTGGT22961.4803734461236913No Hit
GGAAGTAAAAGTCGTAACAAGGATAACGTGGAATTTGGGACTCAGCCAAC12730.8207819672976737No Hit
GGAAGTAAAAGTCGTAACAAGGAAAAAGACAATAAAAAGACCTTCCGACG11390.734383865476866No Hit
GGAAGTAAAAGTCGTAACAAGAGCAGAAGGAATTCAGAAGAGCCAGGGTG10830.698277196059215No Hit
GGAAGTAAAAGTCGTAACAAGGAGGAAGTAGGCCAAGTTGAGCAGGATAT8030.5177438489709599No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTACCGGAAGGTGCGGCTGGAAC6860.44230670036622477No Hit
GGAAGTAAAAGTCGTAACAAGGTATCCCTACGAGAACGTGGGGATGGATC6630.4274771754268324No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCTGTAGGTGAACCTGCAGAAGGATC6600.4255428895651725No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTAGGGGAACCTGCGGCTGGATC6520.4203847939340795No Hit
GGAAGTAAAAGTCGTAACAAGGGTAACACCCAATATGGTTACGATCCTGT4490.28949811729509467No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAAACTGCGGAAGGATC3950.25468097178521687No Hit
GGAAGTAAAAGTCGTAACAAGGTAGAGATAATGAAGAAACAAAGGTTGGT3560.22953525558363852No Hit
GGAAGTAAAAGTCGTAACAAGGAAAAGTGGGATAGTTTCTTCTTTGGAGA3410.21986382627533912No Hit
GGAAGTAAAAGTCGTAACAAGGGCAGAAGGAATTCAGAAGAGCCAGGGTG3260.21019239696703976No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCTGTAGGTGAACCTGCGGAAGGATC3080.1985866817970805No Hit
GGAAGTAAAAGTCGTAACAAGGTATCCGTACCGGAAGGTGCGGATGGATC2970.19149430030432765No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACATGCGGAAGGATC2530.16312477433331615No Hit
GGAAGTAAAAGTCGTAACAACACTAAATCTTATCTCCAGCCCTCAGAAGG2480.159900964563883No Hit
GGAAGTAAAAGTCGTAACAAGGTTTTCGTAGGTGAACCTGCGGAAGGATC2290.14765048744003714No Hit
GGAAGTAAAAGTCGTAACAAGGAGGAGCTGATCGACTTCGTACAGAATGG2270.14636096353226388No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGTTGAACCTGCGGAAGGATC2210.14249239180894413No Hit
GGAAGTAAAAGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGAAGGATC1970.12701810491566515No Hit
GGAAGTAAAAGTCGTAACAAGGTATTGAAACACTTTGACGTCAAAAATCT1840.118636199515139No Hit
GGAAGTAAAAGTCGTAACAAGGAAAACAGTGAACAGCCTCAGTTCCCTGG1800.1160571516995925No Hit
GGAAGTAAAAGTCGTAACAAGGTGCGGCAAAGGAACTCGCAGCGAGCGAA1780.11476762779181926No Hit
GGAAGTAAAAGTCGTAACAAGGATGTTGCGTCAAGGTTTCGGATAAAGCA1770.11412286583793263No Hit
GGAAGTAAAAGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATC1750.1128333419301594No Hit
GGAAGTAAAAGTCGTAACAAGGCCCACCAAATCGGGATATCGGCACTTAC1730.11154381802238612No Hit
GGAAGTAAAAGTCGTAACAAGGAAAGTGGCATAGATGGTGATAACTTGTA1700.10960953216072626No Hit
GGAAGTAAAAGTCGTAACAAGGATCAAGAGAAAGGGGCTGGGAGATGCTG1690.10896477020683963No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)