FastQCFastQC Report
Sun 21 May 2023
EGAF00007833248

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007833248
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences141739
Sequences flagged as poor quality0
Sequence length235-238
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTAAAAGTTT2277816.070382886855416No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG1865313.160104135065154No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCATTGTTGAAAGTTT1750712.351575783658697No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT106027.4799455336922085No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT102627.240068012332526No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG81705.7641157338488345No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGGGCAAACT66924.721354038055863No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCGTTGTTGAAAGTTT55653.926230606960681No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTG39932.8171498317329737No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTGAAAGTTG34192.4121801339080986No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTG30422.14619829404751No Hit
GCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGAAAGTTT24521.7299402422762966No Hit
GCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCATTGTTGAAAGTTG22941.618467747056209No Hit
GCTGCGTTCTTCATCGATGCGTAGACAGACGAAGCACAGCCAAGTAGCAG19191.3538969514389123No Hit
GCTGCGTTCTTCATCGATGCACGAGCCGAGTGATCCACCGCTAAGAGTCG15491.0928537664298463No Hit
GCTGCGTTCTTCATCGATGCCAGGCAAACAAAGGAACAACACATGCGTGT10910.7697246347159215No Hit
GCTGCGTTCTTCATCGATGCCAGTGCCAAGAGATCCATTGTCAAAAGTTG10890.7683135904726293No Hit
GCTGCGTTCTTCATCGATGCCAAAGCCAAGAGATCCGTTGTTGAAAGTTT9470.6681294491988796No Hit
GCTGCGTTCTTCATCGATGCTGGAGCCAAGAGATCCGTTGTTAAAAGTTT7220.5093869718285017No Hit
GCTGCGTTCTTCATCGATGCGGTCGCGGTCGGCGCAGTCCACTACGAAGA7070.49880414000380985No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCATTGTTAAAAGTTG6930.4889268303007641No Hit
GCTGCGTTCTTCATCGATGCCGTTTCCGAGGCCGGACGATCGGGCAAACT6560.4628225117998575No Hit
GCTGCGTTCTTCATCGATGCGGGAGCCAAGATATCCGTTGTTGAGAGTTG6060.4275464057175513No Hit
GCTGCGTTCTTCATCGATGCCATCTGGCCATGGTTGAGGAGGGTGGGAGC5910.41696357389285943No Hit
GCTGCGTTCTTCATCGATGCGCGGGTTACCTTGTACGACTTGCTGAGACG4950.3492334502148315No Hit
GCTGCGTTCTTCATCGATGCTGGAGCCAAGAGATCCGTTGTTGAAAGTTT4760.33582852990355516No Hit
GCTGCGTTCTTCATCGATGGGAGAACCAAGAGATCCGTTGCCAAAAGTTG4210.2970248132130183No Hit
GCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTAAAAGTTT4110.2899695919965571No Hit
GCTGCGTTCTTCATCGATGAGTGACTGTTGGGCCCCACTGCTGCGACTCT4080.2878530256316187No Hit
GCTGCGTTCTTCATCGATGCTAGAGCCAAGAGATCCGTTGTTGAAAGTTT4010.2829143707800958No Hit
GCTGCGTTCTTCATCGATGCTAGAGCCAAGAGATCCGTTGCTGAAAGTTT3890.2744481053203423No Hit
GCTGCGTTCTTCATCGATGCTGGAACCAAGAGATCCGTTGTTGAAAGTTT3490.24622722045449735No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCCTTGCCGAGAGTCA3340.2356443886298055No Hit
GCTGCGTTCTTCATCGATGCCGATTTGTTTCTCAAAATCACCCTGACCAT3200.22576707892675973No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCAGTTGTTGAAAGTTT3140.22153394619688302No Hit
GCTGCGTTCTTCATCGATGCGCGGGTTACCTTGTTACGACTTGCTGAGAC3110.21941737983194465No Hit
GCTGCGTTCTTCATCGATGCTCATCAGGGATATTGGCCTAAAATTTTCTT3090.21800633558865237No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGATATCCGTTGTTGAGAGTTG2940.20742350376396052No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTG2600.18343575162799228No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAAGCCGGACGATCGGGCAAACT2420.17073635343836208No Hit
GCTGCGTTCTTCATCGATGCACACAGGAGCTCAGAATATACCTAGTGAAG2410.17003083131671592No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCCGTTGCCGAGAGTCA2310.16297561010025471No Hit
GCTGCGTTCTTCATCGATGCCCCTTCCTTCCCATGCCTTAGCTTCCTCCT2020.1425154685725171No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTT1890.13334368099111746No Hit
GCTGCGTTCTTCATCGATGCCGAATTCTTCGGCGTAGGCAAGGATGGGCA1730.12205532704477949No Hit
GCTGCGTTCTTCATCGATGCGCGGGTTACCTTGTTACGACGCTGAGACGA1690.119233238558195No Hit
GCTGCGTTCTTCATCGATGCAGACCTGTGTCTACCCTCGTGTGACACTGG1630.11500010582831824No Hit
GCTGCGTTCTTCATCGATGCCCCTCGACCGCTATCCGGTAGCCACCCGCT1620.11429458370667213No Hit
GCTGCGTTCTTCATCGATGCACACATGGGGGCCACGTCAGGTGACCACTC1570.11076697309844151No Hit
GCTGCGTTCTTCATCGATGCCACCACCTCAATGCCATCTCGCTGATCTGG1490.1051227961252725No Hit
GCTGCGTTCTTCATCGATGCCGAGCTATCAGTTGTCAACTATGAGCAGAG1440.10159518551704189No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)