FastQCFastQC Report
Sun 21 May 2023
EGAF00007833254

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007833254
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences187497
Sequences flagged as poor quality0
Sequence length236-238
%GC54

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG9622651.32135447500493No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCTAGATATCCGTTGCCGGGAGTCG67803.6160578569257105No Hit
GCTGCGTTCTTCATCGATGCAACCAACCTTGGGGCTGCGTTCTTCATCGA48592.5915081307967593No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT44612.379238067809085No Hit
GCTGCGTTCTTCATCGATGCAACCAACCTTGGCGCTGCGTTCTTCATCGA44582.3776380422086754No Hit
GCTGCGTTCTTCATCGATGCCATCTGGCCATGGTTGAGGAGGGTGGGAGC44402.3680378886062177No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATCAAAATAA42722.27843645498328No Hit
GCTGCGTTCTTCATCGATGCCAAATATACCGCTGTATCTATACTCCCCCC40812.176568158423868No Hit
GCTGCGTTCTTCATCGATGCAACCAACCTTGGTGCTGCGTTCTTCATCGA26421.4090892120940601No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG24811.3232211715387445No Hit
GCTGCGTTCTTCATCGATGCGTAGACAGACGAAGCACAGCCAAGTAGCAG20381.0869507245449261No Hit
GCTGCGTTCTTCATCGATGCAACCAACCTTGGAGCTGCGTTCTTCATCGA20181.076283887208862No Hit
GCTGCGTTCTTCATCGATGAGTGACTGTTGGGCCCCACTGCTGCGACTCT20011.0672170754732075No Hit
GCTGCGTTCTTCATCGATGCAGGTATCGAGCATGCCCTCAAGGCCTTCGA18670.9957492653215785No Hit
GCTGCGTTCTTCATCGATTTCACCCAACAATGCTTCAGGAGAAACGACAA16030.8549470124855331No Hit
GCTGCGTTCTTCATCGATGCCCGCATGCCTGTTCGTCGCTACGAGGTGCT13690.7301450156535838No Hit
GCTGCGTTCTTCATCGATGCAACCAACCTTGGGGCTGCGTTCTTCATCGG13480.7189448364507165No Hit
GCTGCGTTCTTCATCGATGCAGAGCTTGACGTCGCGTGGGCAGATCATCC12690.6768108289732635No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT10690.5701424556126231No Hit
GCTGCGTTCTTCATCGACTCTTACTACCTAGGCATCCTTTGTGTGCCCTT9330.49760796172738764No Hit
GCTGCGTTCTTCATCGATGCAACCAACCTTGGCGCTGCGTTCTTCATCGG7850.41867336544051376No Hit
GCTGCGTTCTTCATCGATGCCCACCATCACCACCAAATCCTTTCGGCCCT6780.36160578569257107No Hit
GCTGCGTTCTTCATCGATGCAACCAACCTTGGTGCTGCGTTCTTCATCGG5890.3141383595470861No Hit
GCTGCGTTCTTCATCGATGCAACCAACCTTGGAGCTGCGTTCTTCATCGG5190.27680442887086193No Hit
GCTGCGTTCTTCATCGATGCGGAGCTTGACGTCGCGTGGGCAGATCATCC4870.25973748913315947No Hit
GCTGCGTTCTTCATCGAAGAAAGGCACTGGTAGGCCTAAGTGGACTTGAA4490.23947049819463775No Hit
GCTGCGTTCTTCATCGATGCACCAACCTTGGGGCTGCGTTCTTCATCGAT4390.23413707952660576No Hit
GCTGCGTTCTTCATCGATGCACCAACCTTGGCGCTGCGTTCTTCATCGAT4390.23413707952660576No Hit
GCTGCGTTCTTCATCGATGCGAGAGACGAGATATCCGTTGCCGAGAGTCG3930.20960335365365845No Hit
GCTGCGTTCTTCATCGATGCGTTTTTGTTCTCTGTTTTTTTCTTTACGCT3920.20907001178685525No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCA3790.20213656751841363No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCTGTTGCCGAGAGTCG3430.18293626031349836No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCGTTGTTGAAAGTTT3420.18240291844669515No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCATTGCCGAGAGTCG3370.17973620911267912No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGACGAGAGTCG3320.17706949977866313No Hit
GCTGCGTTCTTCATCGATGAACCAACCTTGGCGCTGCGTTCTTCATCGAT3250.17333610671104072No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGATATCCGTTGCCGAGAGTCG3220.1717360811106311No Hit
GCTGCGTTCTTCATCGATGAACCAACCTTGGGGCTGCGTTCTTCATCGAT3140.16746934617620549No Hit
GCTGCGTTCTTCATCGATGCCCCTTCCTTCCCATGCCTTAGCTTCCTCCT3000.16000256004096064No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTGAAAGTTG2950.15733585070694464No Hit
GCTGCGTTCTTCATCGATTCGAGAGCCGAGATATCCGTTGCCGAGAGTCG2910.15520248323973182No Hit
GCTGCGTTCTTCATCGATGCCTCAATGGCTGCGAGCCTGGTTTCGAGGGT2730.1456023296372742No Hit
GCTGCGTTCTTCATCGATGCTTTTCAGTGCGTGCCCTTTGCGCATCTGCG2720.145068987770471No Hit
GCTGCGTTCTTCATCGATGCGGCTACGGTAAGACGTAGAAACAGTTTGGC2700.1440023040368646No Hit
GCTGCGTTCTTCATCGATGCGTGAGCCGAGATATCCGTTGCCGAGAGTCG2590.13813554350202936No Hit
GCTGCGTTCTTCATCGATGCTGTCCATGGTCACGCGATGCTCTCCTCGAT2550.13600217603481657No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTAAAAGTTT2540.13546883416801336No Hit
GCTGCGTTCTTCATCGATGCAATAAGCGGAGAAACGACAATCGCCGTTCC2270.1210686037643269No Hit
GCTGCGTTCTTCATCGATGCTGTCCGATGTTACGGTAGTGGGCGTTTTCA2200.11733521069670447No Hit
GCTGCGTTCTTCATCGATGCCTATCACACCATTTAAGATGTTTTCCTGTG2190.11680186882990129No Hit
GCTGCGTTCTTCATCGATGCACGAGCCGAGTGATCCACCGCTAAGAGTCG2160.11520184322949167No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCATTGTTGAAAGTTT2150.11466850136268847No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCCGTTGCCGAGAGTCG2140.11413515949588526No Hit
GCTGCGTTCTTCATCGATGCGAGGTTGTTGAATGCGCGAGCGTCAGAAGG2110.11253513389547565No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCTAGATATCCGTTGCCGAGAGTCG2040.10880174082785324No Hit
TCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG2030.10826839896105003No Hit
GCTGCGTTCTTCATCGACGACAGTCTCGACTATCTCGAGCGAATCGACGA2000.10666837336064043No Hit
GCTGCGTTCTTCATCGATGAACCAACCTTGGTGCTGCGTTCTTCATCGAT1990.10613503149383724No Hit
GCTGCGTTCTTCATCGATGCTAGGCTTTTTACTTCTTCTTTTGCTTCAGC1940.10346832215982123No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)