FastQCFastQC Report
Sun 21 May 2023
EGAF00007833264

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007833264
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences79593
Sequences flagged as poor quality0
Sequence length236-238
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCGTTGTTGAAAGTTT2967337.28091666352569No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT1306216.410990916286607No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG1025212.88052969482241No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG41165.171309034714108No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCATTGTTGAAAGTTT25113.1548000452301084No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTGAAAGTTG18342.3042227331549254No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT14701.8468960838264672No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCATTGTTGAAAGTTG12381.5554131644742628No Hit
GCTGCGTTCTTCATCGATGCAAGGTAACGACGCTGCGTTCTTCATCGATG12351.5516439887929843No Hit
GCTGCGTTCTTCATCGAGGTCGATGAAGGAGTCATAGCGCTCGGAGCGCA12061.5152086238739588No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTG5910.7425276092118653No Hit
GCTGCGTTCTTCATCGATGTCGATGAAGGAGTCATAGCGCTCGGAGCGCA5750.7224253389117133No Hit
GCTGCGTTCTTCATCGATGCTAAGGTAACGACGCTGCGTTCTTCATCGAT5190.6520673928611813No Hit
GCTGCGTTCTTCATCGATGCGCGTGCTGCGTCTAAGCTACCTTGTTACGA3820.4799417034161296No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATCAAAATAA3340.4196348925156735No Hit
GCTGCGTTCTTCATCGATGCTGTTTAATTTTTCAAGAACGAGTTCGTAAT3200.4020454060030405No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGGGCAAACT2700.33922581131506535No Hit
GCTGCGTTCTTCATCGATGCGTTTTTGTTCTCTGTTTTTTTCTTTACGCC2680.3367130275275464No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTCGAAAGTTG2650.33294385184626785No Hit
GCTGCGTTCTTCATCGAAGAAAGGCACTGGTAGGCCTAAGTGGACTTGAA2650.33294385184626785No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGTCGAGAGTCG2640.33168745995250837No Hit
GCTGCGTTCTTCATCGATGCCCCTTCCTTCCCATGCCTTAGCTTCCTCCT2300.2889701355646853No Hit
GCTGCGTTCTTCATCGATGCCAGTTGGCGGGTGAATACTGTAATGTCTTC2270.2852009598834068No Hit
GCTGCGTTCTTCATCGATGGGAGAACCAAGAGATCCGTTGTCGAAAGTTG2220.2789190004146093No Hit
GCTGCGTTCTTCATCGATGCAGGTAACGACGCTGCGTTCTTCATCGATGC2000.2512783787519003No Hit
GCTGCGTTCTTCATCGATGCAAGGTAACGACGCTGCGTTCTTCATCGGCT2000.2512783787519003No Hit
GCTGCGTTCTTCATCGATGCGACCTAAAGTGAAATAGTTGCTTGCTGGGT1940.24374002738934328No Hit
GCTGCGTTCTTCATCGATGCGATAGACCGAGCGGCGCATGGGCGAGGCGT1710.21484301383287474No Hit
GCTGCGTTCTTCATCGATGCGGATTATCGGGGAGAAATCGGCGTAATCTT1700.21358662193911526No Hit
GCTGCGTTCTTCATCGATGCGTTTTTGTTCTCTGTTTTTTTCTTTACGCT1590.19976631110776075No Hit
GCTGCGTTCTTCATCGATGCCGGAAACAAGAGATCCGTTGTTGAAAGTTT1570.19725352732024173No Hit
GCTGCGTTCTTCATCGACTCTTACTACCTAGGCATCCTTTGTGTGCCCTT1560.19599713542648223No Hit
GCTGCGTTCTTCATCGATGCATTCAATATTGCTATTTACTTTGCAAATTA1280.16081816240121619No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTAAAAGTTT1280.16081816240121619No Hit
GCTGCGTTCTTCATCGATGCCGACGAATATGCGCAAAACCCCGGCCTGCA1270.15956177050745668No Hit
GCTGCGTTCTTCATCGATGCCCACGCCGGTACGCTCGGCACGCTCGGCGC1250.15704898671993767No Hit
GCTGCGTTCTTCATCGATGCGTCGTTATTCTACTTCGCAAATCAAAATAA1250.15704898671993767No Hit
GCTGCGTTCTTCATCGATGCACGAGCCGAGTGATCCACCGCTAAGAGTCG1240.1557925948261782No Hit
GCTGCGTTCTTCATCGATGATGATGATGATGATGATGATGCTGATGATGA1210.15202341914489967No Hit
GCTGCGTTCTTCATCGATGCCTATCACACCATTTAAGATGTTTTCCTGTG1180.14825424346362118No Hit
GCTGCGTTCTTCATCGATGCCGTAACCAAGAGATCCGTTGTTGAAAGTTT1090.13694671641978565No Hit
GCTGCGTTCTTCATCGATGAAGGTAACGACGCTGCGTTCTTCATCGATGA1060.13317754073850716No Hit
GCTGCGTTCTTCATCGATGCACACAGGAGCTCAGAATATACCTAGTGAAG1060.13317754073850716No Hit
GCTGCGTTCTTCATCGATGCTAAGGTAACGACGCTGCGTTCTTCATCGGC960.12061362180091215No Hit
GCTGCGTTCTTCATCGATGAGTGACTGTTGGGCCCCACTGCTGCGACTCT940.11810083801339313No Hit
GCTGCGTTCTTCATCGATGCCAGGCAAACAAAGGAACAACACTAATGTGT890.11181887854459563No Hit
GCTGCGTTCTTCATCGATGCCTGTGAACCGATAACCGCGGTAGTAATAGA830.10428052718203862No Hit
GCTGCGTTCTTCATCGATTCCGGAACCAAGAGATCCGTTGTTGAAAGTTT830.10428052718203862No Hit
GCTGCGTTCTTCATCGATGCAAGGTAACGACGCTGCGTTCTTCATCCTTG820.10302413528827913No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCATTGTTAAAAGTTT820.10302413528827913No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)