FastQCFastQC Report
Sun 21 May 2023
EGAF00007833278

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007833278
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences64330
Sequences flagged as poor quality0
Sequence length235-238
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG2846044.240634229752835No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT60199.35644333903311No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG45367.05114254624592No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT31784.940152339499456No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCGTTGTTGAAAGTTT26394.102285092491839No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCATTGTTGAAAGTTT26044.047878128400435No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTAAAAGTTT21913.4058759521218716No Hit
GCTGCGTTCTTCATCGATGTCCCCCTCTGCCTGCTGCGTCTTCTCCACCT20933.2535364526659416No Hit
GCTGCGTTCTTCATCGATGCATATGTGGTGTGGCCCACATTTCTGTATGC15692.4389864759832114No Hit
GCTGCGTTCTTCATCGATGCCATCTGGCCATGGTTGAGGAGGGTGGGAGC11331.7612311518731538No Hit
GCTGCGTTCTTCATCGATGCCCCTTCCTTCCCATGCCTTAGCTTCCTCCT6501.010415047411783No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTG6491.0088605627234573No Hit
GCTGCGTTCTTCATCGATGCACGAGCCGAGTGATCCACCGCTAAGAGTCG4160.6466656303435411No Hit
GCTGCGTTCTTCATCGATGCCACCACCTCAATGCCATCTCGCTGATCTGG3720.5782683040572051No Hit
GCTGCGTTCTTCATCGATGCTGTAAAGGTAACACTAGAAGCACCTCGCAG3710.5767138193688792No Hit
GCTGCGTTCTTCATCGATGCACACAGGAGCTCAGAATATACCTAGTGAAG3670.570495880615576No Hit
GCTGCGTTCTTCATCGATGAGTGACTGTTGGGCCCCACTGCTGCGACTCT3580.5565055184206436No Hit
GCTGCGTTCTTCATCGATGCCAGGCAAACAAAGGAACAACACACATGTGT3090.4803357686926784No Hit
GCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGAAAGTTT2630.40882947302969064No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCATTGTTGAAAGTTG2030.31556039173014144No Hit
GCTGCGTTCTTCATCGATGCGCGTGCTGCGTCTAGGCTACCTTGTTACGA2020.31400590704181564No Hit
GCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTAAAAGTTT1990.3093424529768382No Hit
GCTGCGTTCTTCATCGATGGGAGAACCAAGAGATCCGTTGTCGAAAGTTG1880.29224312140525416No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTG1770.2751437898336701No Hit
GCTGCGTTCTTCATCGATGCAGACCTGTGTCTACCCTCGTGTGACACTGG1700.2642623970153894No Hit
GCTGCGTTCTTCATCGATGCCTAGGCCCGAACTGAGGACAGTCTGTCCTT1340.2083009482356599No Hit
TCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG1270.19741955541737913No Hit
GCTGCGTTCTTCATCGATGCGGTCGCGGTCGGCGCAGTCCACTACGAAGA1220.18964713197575006No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGCTGAAAGTTT1220.18964713197575006No Hit
GCTGCGTTCTTCATCGATGCACACAGTGGTGCCCGCCTGCTCGTTCCTCT1200.1865381625990984No Hit
GCTGCGTTCTTCATCGATGCCAAGCCCCAGCCTTTCATGGGCCCTGGACT1180.18342919322244675No Hit
GCTGCGTTCTTCATCGATGCCGGTGAATTATGCGATGGTGGTGGCGGCGG960.14923053007927872No Hit
GCTGCGTTCTTCATCGATGCCAAAGATCAGCGTGAGAGCACGATCCTGGG910.14145810663764963No Hit
GCTGCGTTCTTCATCGATGCTCATCAGGGATATTGGCCTAAAATTTTCTT880.13679465257267215No Hit
GCTGCGTTCTTCATCGATGCCCAGTGAAGTGCAGCGGGCAGCATCGGTCA880.13679465257267215No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATCAAAATAA870.13524016788434634No Hit
GCTGCGTTCTTCATCGATGCTGGTCTTCGTCACTGTCTTCCTGGTCCTGC850.1321311985076947No Hit
GCTGCGTTCTTCATCGATAAAGTCGAGAGAAATTTGCGCCTGTCCGAGGT750.11658635162443651No Hit
GCTGCGTTCTTCATCGATGCCAAGGCAAATGAAAATGAGGTGCAAACAGG740.11503186693611067No Hit
GCTGCGTTCTTCATCGATGGGAGAACCAAGAGATCCGTTGCCAAAAGTTG740.11503186693611067No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)