FastQCFastQC Report
Sun 21 May 2023
EGAF00007833282

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007833282
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences104491
Sequences flagged as poor quality0
Sequence length235-238
%GC54

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGGGCAAACT5555153.16343034328316No Hit
GCTGCGTTCTTCATCGATGCCGATTTGTTTCTCAAAATCACCCTGACCAT1095910.487984611114832No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG64526.1746944712941785No Hit
GCTGCGTTCTTCATCGATGCCAGGCAAACAAAGGAACAACACACATGTGT34003.2538687542467777No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG32113.07299193231953No Hit
GCTGCGTTCTTCATCGATGCCGTTTCCGAGGCCGGACGATCGGGCAAACT31643.028011981893177No Hit
GCTGCGTTCTTCATCGATGCCATCTGGCCATGGTTGAGGAGGGTGGGAGC12341.1809629537472126No Hit
GCTGCGTTCTTCATCGAAGAAAGGCACTGGTAGGCCTAAGTGGACTTGAA12301.1771348728598636No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTAAAAGTTT12201.1675646706414906No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT12101.1579944684231178No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAAGCCGGACGATCGGGCAAACT11701.1197136595496264No Hit
GCTGCGTTCTTCATCGATGCCGATATGTTTCTCAAAATCACCCTGACCAT9750.9330947162913552No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT8710.8335646132202773No Hit
GCTGCGTTCTTCATCGATGCGCACACTACTCCCACCGCCCCCGAGTGCCT8430.8067680470088333No Hit
GCTGCGTTCTTCATCGATGCACGATCCTTCCTCGCTGCAGGATCCTTCCT6850.6555588519585419No Hit
GCTGCGTTCTTCATCGATGCACGAGCCGAGTGATCCACCGCTAAGAGTCG6740.6450316295183317No Hit
GCTGCGTTCTTCATCGATGCCTATCACACCATTTAAGATGTTTTCCTGTG5860.5608138499966504No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCGTTGTTGAAAGTTT4680.4478854638198505No Hit
GCTGCGTTCTTCATCGATGTGAGAGCCGAGATATCCGTTGCCGAGAGTCG4090.3914212707314506No Hit
GCTGCGTTCTTCATCGACTCTTACTACCTAGGCATCCTTTGTGTGCCCTT3380.32347283498100315No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATCAAAATAA3270.312945612540793No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCATTGTTGAAAGTTT2980.28519202610751165No Hit
GCTGCGTTCTTCATCGATGCGCGTGCTGCGTCTAAGGGTTCGATGCGCGT2480.23734101501564725No Hit
TCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGGGCAAACT2430.23255591390646085No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCATTGTTAAAAGTTG2310.22107167124441338No Hit
GCTGCGTTCTTCATCGATGCATATGTGGTGTGGCCCACATTTCTGTATGC2140.2048023274731795No Hit
GCTGCGTTCTTCATCGATGCGCGTGCTGCGTCTAAGTTACCTTGTTACGA2100.20097424658583035No Hit
GCTGCGTTCTTCATCGATGCTTGCCCAGTGCATCTGACCGCTGACAAAAA1870.17896278148357275No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGATTCG1850.17704874103989818No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGGTCAAACT1740.166521518599688No Hit
GCTGCGTTCTTCATCGATGCACGATCATTCCTGGTTGCACGATCCTTCCT1700.16269343771233885No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGGACAAACT1590.1521662152721287No Hit
GCTGCGTTCTTCATCGATGCCAGGCAAACAAAGGAACAACACACACGTGT1580.1512091950502914No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCCGTTGCCGAGAGTCA1530.14642409394110498No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGTCCGGACGATCGGGCAAACT1520.14546707371926768No Hit
GCTGCGTTCTTCATCGATGCCCCTTCCTTCCCATGCCTTAGCTTCCTCCT1500.1435530332755931No Hit
GCTGCGTTCTTCATCGATGCGGTCGTCGCAGGCCAAACTGAGGCGGATCA1500.1435530332755931No Hit
GCTGCGTTCTTCATCGATGCACACATGGGGGCCACAGCAGGGGACCGCTC1450.13876793216640668No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCACTGTTGAAGGTTG1260.1205845479514982No Hit
GCTGCGTTCTTCATCGATGCGATAAAGGTTGGCATCGTGTTTAATGGGTG1160.11101434573312534No Hit
GCTGCGTTCTTCATCGATGAGTGACTGTTGGGCCCCACTGCTGCGACTCT1130.10814328506761348No Hit
GCTGCGTTCTTCATCGATGCTACCTTGTTACGACTGCGCGTGCTGCGTCT1060.10144414351475246No Hit
GCTGCGTTCTTCATCGATGTCGCTTCCGAGGCCGGACGATCGGGCAAACT1060.10144414351475246No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)