FastQCFastQC Report
Sun 21 May 2023
EGAF00007833287

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007833287
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences74605
Sequences flagged as poor quality0
Sequence length247-250
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATC3583248.02895248307754No Hit
GGAAGTAAAAGTCGTAACAAGGAGGATCTTAGCACATGCACATAGAAACA1331417.8459888747403No Hit
GGAAGTAAAAGTCGTAACAAGGCTCAAGTTGAAAAACGCTTGAACCAAGT61608.256819248039676No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTACCGGAAGGTGCGGCTGGATC30774.124388445814624No Hit
GGAAGTAAAAGTCGTAACAAGGTATCCGTACGGGAACGTGCGGATGGATC13531.8135513705515718No Hit
GGAAGTAAAAGTCGTAACAAGGAAAAAAGGACCGGAATCTGCTTCATACG12931.733127806447289No Hit
GGAAGTAAAAGTCGTAACAAGGTCTCCGTAGGTGAACCTGCGGAGGGATC7551.0119965149788888No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTAGGGGAACCTGCGGCTGGATC6490.869914885061323No Hit
GGAAGTAAAAGTCGTAACAAGGAGGAAGTAGGCCAAGTTGAGCAGGATAT6330.848468601300181No Hit
GGAAGTAAAAGTCGTAACAAGGAAGGAGCATATATGATTCAGCAGGAAAC5670.7600026807854702No Hit
GGAAGTAAAAGTCGTAACAAGGACATTCAAAAGGGGAGCGCGCGGAAGTG3970.5321359158233363No Hit
GGAAGTAAAAGTCGTAACAAGGAACTGGCGACGTGCTTCAGGACTGCCTA3960.5307955230882648No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTATCGGAAGGTGCGGCTGGATC3730.4999664901816232No Hit
GGAAGTAAAAGTCGTAACAAGGCTATTGGTGGGTGCAGATGAAAGCTGTG3700.4959453119764091No Hit
GGAAGTAAAAGTCGTAACAAGGCGGCCGATGGCAGCATCTACAACGTCGG3020.4047986059915555No Hit
GGAAGTAAAAGTCGTAACAAGCCACAGAAGAAATGAACGATCGTAGGGAT2570.34448093291334364No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCTGTAGGTGAACCTGCAGAAGGATC2550.34180014744320086No Hit
GGAAGTAAAAGTCGTAACAAGGGCCGACAAGTTAGCGGTTCTGAATGCTC2390.32035386368205887No Hit
GGAAGTAAAAGTCGTAACAAGGGCGTGGGGCAGAAGGTGGAAAATGCGCG2120.2841632598351317No Hit
GGAAGTAAAAGTCGTAACAAGGTATCCGTAGGTGAACCTGCGGAAGGATC2020.2707593324844179No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAATGATC1800.24127069231284765No Hit
GGAAGTAAAAGTCGTAACAAGGCTAAGAAGGACTACAGAAAGAAACAGGG1700.22786676496213393No Hit
GGAAGTAAAAGTCGTAACAAGGGCGACACGATCGAATTTCACGCTGGCAA1670.2238455867569198No Hit
GGAAGTAAAAGTCGTAACAAGGACGCACATCATGATGCTCAGGAAGCTGG1620.21714362308156288No Hit
GGAAGTAAAAGTCGTAACAAGGACAGAGCAACGTATCAGGCGGCGGTGGC1610.21580323034649154No Hit
GGAAGTAAAAGTCGTAACAAGGTCTCCGTTGGTGAACCAGCGGAGGGATC1600.21446283761142015No Hit
GGAAGTAAAAGTCGTAACAAGGGCCAGAGCGAGGAGCGCAATCGTGAGAT1480.19837812479056366No Hit
GGAAGTAAAAGTCGTAACAAGGACTACAGAAAGAAACAGGGTCACAGACA1390.18631459017492125No Hit
GGAAGTAAAAGTCGTAACAAGGAAGCGCAGGTGCTGCAGGACGGTCGTCA1310.17559144829435025No Hit
GGAAGTAAAAGTCGTAACAAGGAGGCCAAGCGCATCGTCGTACAGTCGAT1270.17022987735406475No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTACCGGAAGGTGCGGCTGGAAC1270.17022987735406475No Hit
GGAAGTAAAAGTCGTAACAAGGTGGCTGAACTGACGTGGGAACAGGTCCG1180.15816634273842237No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCCATAGGTGAACCTGCGGAAGGATC1120.1501239863279941No Hit
GGAAGTAAAAGTCGTAACAAGGTGTACATAAAAGGCGACGGCGGAAAATG1020.13672005897728035No Hit
GGAAGTAAAAGTCGTAACAAGGAACTGGCAACGTGCTTCAGGACTGCCTA1010.13537966624220896No Hit
GGAAGTAAAAGTCGTAACAAGGCATGTTGAAAATGCCATCGTTGCCATTG980.13135848803699485No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGTGGAAGGATC900.12063534615642382No Hit
GGAAGTAAAAGTCGTAACAAGGAACGAAGATGAAGGACACCTCTCCGGCA880.11795456068628109No Hit
GGAAGTAAAAGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGAAGGATC820.10991220427585281No Hit
GGAAGTAAAAGTCGTAACAAGGTATCCGTACGGGAACGTGCGGAAGGATC820.10991220427585281No Hit
GGAAGTAAAAGTCGTAACAAGGGCGACACGATCGAATTCCACGCCGGCAA800.10723141880571008No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTTCTGAAGGATC800.10723141880571008No Hit
GGAAGTAAAAGTCGTAACAAGGCTGAGTTGCACAAACTCTTTTTTGATTT760.10186984786542458No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)