FastQCFastQC Report
Sun 21 May 2023
EGAF00007833303

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007833303
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences72150
Sequences flagged as poor quality0
Sequence length247-250
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATC1851125.656271656271656No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTACCGGAAGGTGCGGCTGGATC1316618.248094248094247No Hit
GGAAGTAAAAGTCGTAACAAGGAACGAAGATGAAGGACACCTCTCCGGCA55717.721413721413721No Hit
GGAAGTAAAAGTCGTAACAAGGCTCAAGTTGAAAAACGCTTGAACCAAGT52527.2792792792792795No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTAGGGGAACCTGCGGCTGGATC45316.279972279972281No Hit
GGAAGTAAAAGTCGTAACAAGGAGGATCTTAGCACATGCACATAGAAACA27783.8503118503118503No Hit
GGAAGTAAAAGTCGTAACAAGGTATCCGTACGGGAACGTGCGGATGGATC24343.373527373527373No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTATCGGAAGGTGCGGCTGGATC17762.4615384615384617No Hit
GGAAGTAAAAGTCGTAACAAGCGGCAAGAAGAATACAATCAACACTTGAC14912.0665280665280665No Hit
GGAAGTAAAAGTCGTAACAAGGAGACGCTGGTCGTGGCTGGCGAACTCGT7861.0893970893970892No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTACCGGAAGGTGCGGCTGGAAC6020.8343728343728344No Hit
GGAAGTAAAAGTCGTAACAAGGAACTGGCAACGTGCTTCAGGACTGCCTA5230.724878724878725No Hit
GGAAGTAAAAGTCGTAACAAGGCATCGATGAAGAACGCAGCCGTATCTCA4940.6846846846846847No Hit
GGAAGTAAAAGTCGTAACAAGGTATCCCTACGAGAACGTGGGGATGGATC4780.6625086625086626No Hit
GGAAGTAAAAGTCGTAACAAGGAACGAAGATGAAGGACAACTCTCCGGCA4330.6001386001386002No Hit
GGAAGTAAAAGTCGTAACAAGGAACGAAGATGAAGGACACATCTCCGGCA4100.5682605682605683No Hit
GGAAGTAAAAGTCGTAACAAGGCATTGAAGGTTTGGTACACGTTTCCGAA3840.5322245322245323No Hit
GGAAGTAAAAGTCGTAACAAGGTCTCCGTTGGTGAACCAGCGGAGGGATC3410.4726264726264726No Hit
GGAAGTAAAAGTCGTAACAAGGAAGGAGCATATATGATTCAGCAGGAAAC3210.4449064449064449No Hit
GGAAGTAAAAGTCGTAACAAGGTATCCGTACCGGAAGGTGCGGATGGATC3080.4268884268884269No Hit
GGAAGTAAAAGTCGTAACAAGGACATTCAAAAGGGGAGCGCGCGGAAGTG2720.376992376992377No Hit
GGAAGTAAAAGTCGTAACAAGGACTACAGAAAGAAACAGGGTCACAGACA2290.3173943173943174No Hit
GGAAGTAAAAGTCGTAACAAGGCATCGAAGGTTTGGTACACGTTTCCGAA2010.2785862785862786No Hit
GGAAGTAAAAGTCGTAACAAGGGAGAAAACGGTGAATGTGAGCGAAGAAG1910.2647262647262647No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCTGTAGGTGAACCTGCAGAAGGATC1910.2647262647262647No Hit
GGAAGTAAAAGTCGTAACAAGGCTAAGAAGGACTACAGAAAGAAACAGGG1860.2577962577962578No Hit
GGAAGTAAAAGTCGTAACAAGGACAACTGGAAGCAATACATCGACGGACT1840.255024255024255No Hit
GGAAGTAAAAGTCGTAACAAGTCCACAGGATTTAGTATCGATGGTAGTTG1370.18988218988218988No Hit
GGAAGTAAAAGTCGTAACAAGGAAGACAACTGAGGAATGGTGATGTTGCG1350.18711018711018712No Hit
GGAAGTAAAAGTCGTAACAAGGTATCCGTACCGGAAGGTGCGGCTGGATC1330.18433818433818433No Hit
GGAAGTAAAAGTCGTAACAAGGGATACTGCCCTCCGCTATGATGAAGAAC1310.18156618156618157No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTACCGGAAGGTGCGTCTGGATC1260.17463617463617465No Hit
GGAAGTAAAAGTCGTAACAAGCGGCAAGAAGAATACGATTAGCACTTGAC1190.16493416493416493No Hit
GGAAGTAAAAGTCGTAACAAGGCGCTACTTCAGCATAAGCACTGCCATCT1170.16216216216216214No Hit
GGAAGTAAAAGTCGTAACAAGGAACTGGCGACGTGCTTCAGGACTGCCTA1150.15939015939015938No Hit
GGAAGTAAAAGTCGTAACAAGGAAAGAAAACAGAATCCGAAAAGAGCACA1070.1483021483021483No Hit
GGAAGTAAAAGTCGTAACAAGGATCTAAAAGCGGAGTGGCCAAACTTTAG1070.1483021483021483No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTACCGGAAGGTGCGGCTTGATC1060.1469161469161469No Hit
GGAAGTAAAAGTCGTAACAAGGTGGCTGAACTGACGTGGGAACAGGTCCG1030.14275814275814275No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAAACTGCGGAAGGATC1030.14275814275814275No Hit
GGAAGTAAAAGTCGTAACAAGGATACCCGTGTTGGCAATATGGCGCTCGT1020.14137214137214135No Hit
GGAAGTAAAAGTCGTAACAAGGGGTGGAGGGCATCGATGAAGAACGCAGC1020.14137214137214135No Hit
GGAAGTAAAAGTCGTAACAAGGTCTCCGTAGGTGAACCTGCGGAGGGATC990.13721413721413722No Hit
GGAAGTAAAAGTCGTAACAAGTCCGTAGTGGTGGCGCATAATATGGAAGC990.13721413721413722No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTACCGGAAGTTGCGGCTGGATC980.13582813582813583No Hit
GGAAGTAAAAGTCGTAACAAGGACGGCATTATTGGTTACGTTCTTGCTAT970.13444213444213446No Hit
GGAAGTAAAAGTCGTAACAAGGTGGCGAGGTTGTCCCACAATCGGATTTC930.1288981288981289No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTACCGTAAGGTGCGGCTGGATC920.1275121275121275No Hit
GGAAGTAAAAGTCGTAACAAGGTAGAGAAAATGAAGAAATAAAGGTTGGT910.12612612612612611No Hit
GGAAGTAAAAGTCGTAACAAGGTGAAGTATTTGGTGTTATCGGTCCAAAT900.12474012474012475No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTACCGGAAGGTGCTGCTGGATC860.11919611919611921No Hit
GGAAGTAAAAGTCGTAACAAGCGGTAAGAAGAATACAATCAACACTTGAC840.11642411642411642No Hit
GGAAGTAAAAGTCGTAACAAGGAAAATATCCTGAATTCGGTCCGGAACCA820.11365211365211365No Hit
GGAAGTAAAAGTCGTAACAAGGAACGAAGATGAAGGACACCTCTCAGGCA800.11088011088011088No Hit
GGAAGTAAAAGTCGTAACAAGGAGGCGAAGCGTTCGGACTGTTCAACGGA790.1094941094941095No Hit
GGAAGTAAAAGTCGTAACAAGGTGTTGCCGTCTTTGTCGGTAACATCTTT780.10810810810810811No Hit
GGAAGTAAAAGTCGTAACAAGGAAAGAAAACAGAATCCGAAAAGAACACA780.10810810810810811No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTTCGGAAGGATC780.10810810810810811No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCTTACCGGAAGGTGCGGCTGGATC750.10395010395010396No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)