FastQCFastQC Report
Sun 21 May 2023
EGAF00007833305

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007833305
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences69615
Sequences flagged as poor quality0
Sequence length247-250
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATC2644537.987502693385046No Hit
GGAAGTAAAAGTCGTAACAAGGACATTCAAAAGGGGAGCGCGCGGAAGTG1525021.906198376786612No Hit
GGAAGTAAAAGTCGTAACAAGGAACGAAGATGAAGGACACCTCTCCGGCA846312.156862745098039No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTAGGGGAACCTGCGGCTGGATC26973.874165050635639No Hit
GGAAGTAAAAGTCGTAACAAGGTATCCGTACGGGAACGTGCGGATGGATC17802.5569202039790273No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTATCGGAAGGTGCGGCTGGATC17102.4563671622495153No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTACCGGAAGGTGCGGCTGGATC11971.7194570135746607No Hit
GGAAGTAAAAGTCGTAACAAGGAGGATCTTAGCACATGCACATAGAAACA6790.9753645047762695No Hit
GGAAGTAAAAGTCGTAACAAGGAGGAAGTAGGCCAAGTTGAGCAGGATAT5390.7742584213172449No Hit
GGAAGTAAAAGTCGTAACAAGCGGCAAGAAGAATACAATCAACACTTGAC5120.7354736766501472No Hit
GGAAGTAAAAGTCGTAACAAGGAAAACAGTGAACAGCCTCAGTTCCCTGG4940.7096171802054155No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCTGTAGGTGAACCTGCAGAAGGATC3950.5674064497593909No Hit
GGAAGTAAAAGTCGTAACAAGGTCTCCGTTGGTGAACCAGCGGAGGGATC3760.5401134812899518No Hit
GGAAGTAAAAGTCGTAACAAGGTCTCCGTAGGTGAACCTGCGGAGGGATC2460.35337211807800045No Hit
GGAAGTAAAAGTCGTAACAACACTAAATCTTATCTCCAGCCCTCAGAAGG2330.33469798175680526No Hit
GGAAGTAAAAGTCGTAACAAGGACAGTAAAGTCATCCCGACCCAGCGCGA2200.31602384543561013No Hit
GGAAGTAAAAGTCGTAACAAGGTATCCCTACGAGAACGTGGGGATGGATC2180.3131509013861955No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTACCGGAAGGTGCGGCTGGAAC2140.30740501328736625No Hit
GGAAGTAAAAGTCGTAACAAGGACATTCAAAGGGGGAGCGCGCGGAAGTG2080.2987861811391223No Hit
GGAAGTAAAAGTCGTAACAAGGGCCAGCGAATCTAATAATGAAGAATCAG1980.2844214608920491No Hit
GGAAGTAAAAGTCGTAACAAGGACAATGTGTCGTTATCGATTACGGTATC1950.2801120448179272No Hit
GGAAGTAAAAGTCGTAACAAGGCTCAAGTTGAAAAACGCTTGAACCAAGT1940.27867557279321986No Hit
GGAAGTAAAAGTCGTAACAACAGTGAAGAAACACCACAGACCAAGATTCA1900.27292968469439055No Hit
GGAAGTAAAAGTCGTAACAAGGACTACAGAAAGAAACAGGGTCACAGACA1780.25569202039790273No Hit
GGAAGTAAAAGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGAAGGATC1420.2039790275084393No Hit
GGAAGTAAAAGTCGTAACAAGGAAGGAGCATATATGATTCAGCAGGAAAC1400.20110608345902461No Hit
GGAAGTAAAAGTCGTAACAAGAGCAGAAGGAATTCAGAAGAGCCAGGGTG1350.19392372333548805No Hit
GGAAGTAAAAGTCGTAACAAGCCACAGAAGAAATGAACGATCGTAGGGAT1290.1853048911872441No Hit
GGAAGTAAAAGTCGTAACAAGGTAGAGAAAATGAAGAAATAAAGGTTGGT1240.17812253106370754No Hit
GGAAGTAAAAGTCGTAACAAGGTATCCGTACCGGAAGGTGCGGATGGATC1240.17812253106370754No Hit
GGAAGTAAAAGTCGTAACAAGGACATTCAAAGGGGAGCGCGCGGAAGTGG1030.14795661854485384No Hit
GGAAGTAAAAGTCGTAACAAGGATAACGTGGAATTTGGGACTCAGCCAAC890.12784601019895137No Hit
GGAAGTAAAAGTCGTAACAAGGGAGAAAACTGTGAATGTGAGCGAAGAAG860.12353659412482941No Hit
GGAAGTAAAAGTCGTAACAAGGATGCGACTGAATAACGTGGTCGATTAAC810.11635423400129283No Hit
GGAAGTAAAAGTCGTAACAAGGAAGACAACTGAGGAATGGTGATGTTGCG800.11491776197658551No Hit
GGAAGTAAAAGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATC790.1134812899518782No Hit
GGAAGTAAAAGTCGTAACAAGGTTCCAGACCGAAGAGATAAAGCTGCGAT750.10773540185304892No Hit
GGAAGTAAAAGTCGTAACAAGGTATCCGTAGGTGAACCTGCGGAAGGATC740.10629892982834159No Hit
GGAAGTAAAAGTCGTAACAAGGCATCGATGAAGAACGCAGCCGTACACCT700.10055304172951231No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)