FastQCFastQC Report
Sun 21 May 2023
EGAF00007833311

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007833311
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences158110
Sequences flagged as poor quality0
Sequence length247-250
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATC5227233.060527480867755No Hit
GGAAGTAAAAGTCGTAACAAGGAACGAAGATGAAGGACACCTCTCCGGCA2575016.28612990955664No Hit
GGAAGTAAAAGTCGTAACAAGGGCCAGCGAATCTAATAATGAAGAATCAG133848.464992726582759No Hit
GGAAGTAAAAGTCGTAACAAGGAGGATCTTAGCACATGCACATAGAAACA105306.659920308645879No Hit
GGAAGTAAAAGTCGTAACAAGGCTATGTAAAAAATGACGGTAATAATGGT84145.321611536272215No Hit
GGAAGTAAAAGTCGTAACAAGGACATTCAAAAGGGGAGCGCGCGGAAGTG80615.098349250521789No Hit
GGAAGTAAAAGTCGTAACAAGGATGTTGCGTCAAGGTTTCGGATAAAGCA72344.57529568022263No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTAGGGGAACCTGCGGCTGGATC66024.175573967490987No Hit
GGAAGTAAAAGTCGTAACAAGGAGGAAGTAGGCCAAGTTGAGCAGGATAT39262.483081399025995No Hit
GGAAGTAAAAGTCGTAACAAGGGCCAGCCAGGGAGAGGTCTCCCCAGGCC21131.3364113591803175No Hit
GGAAGTAAAAGTCGTAACAACACTAAATCTTATCTCCAGCCCTCAGAAGG13050.8253747391056859No Hit
GGAAGTAAAAGTCGTAACAAGGCATCGAAGGTTTGGTACACGTTTCCGAA10040.6350009487065966No Hit
GGAAGTAAAAGTCGTAACAAGGTATCCGTACGGGAACGTGCGGATGGATC8920.5641641894883309No Hit
GGAAGTAAAAGTCGTAACAAGGAATCATCATGCAGTGAGGAAGGATCATG6630.4193283157295554No Hit
GGAAGTAAAAGTCGTAACAAGGAAAACAGTGAACAGCCTCAGTTCCCTGG6620.4186958446651066No Hit
GGAAGTAAAAGTCGTAACAAGGTCTCCGTTGGTGAACCAGCGGAGGGATC4940.31244070583770794No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCAGAAGGATC4610.2915691607108975No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCCGTATGTGAACCTGTGGAAGGATC4550.2877743343242047No Hit
GGAAGTAAAAGTCGTAACAAGGACTACAGAAAGAAACAGGGTCACAGACA4520.2858769211308583No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTACCGGAAGGTGCGGCTGGATC4400.27828726835747264No Hit
GGAAGTAAAAGTCGTAACAAGGAAGCTGAGTTTCGCCTCCCAGGCCCAGC4170.2637404338751502No Hit
GGAAGTAAAAGTCGTAACAAGGATGTTGCGTTAAGGTTTCGGATAAAGCA4120.2605780785529062No Hit
GGAAGTAAAAGTCGTAACAAGGGCTGGCAGGGGCTGTGGGAGGAGTTTGT4020.2542533679084182No Hit
GGAAGTAAAAGTCGTAACAAGAGCAGAAGGAATTCAGAAGAGCCAGGGTG3780.23907406236164694No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTATCGGAAGGTGCGGCTGGATC3740.23654417810385175No Hit
GGAAGTAAAAGTCGTAACAAGGCAGGGTGGGAGGAGGTGCCAGGAATTTG3700.23401429384605651No Hit
GGAAGTAAAAGTCGTAACAAGGATGCGACTGAATAACGTGGTCGATTAAC3550.22452722787932455No Hit
GGAAGTAAAAGTCGTAACAAGGAAATGCGGATCCTCATGTTGGGCCTGGA2990.18910884827019164No Hit
GGAAGTAAAAGTCGTAACAAGGAACGAAGATGAAGGACAACTCTCCGGCA2760.1745620137878692No Hit
GGAAGTAAAAGTCGTAACAAGGCAAGATAACCTCGGGGCTGCAAGTTGGC2670.16886977420783No Hit
GGAAGTAAAAGTCGTAACAAGGTTCCAGACCGAAGAGATAGAGCTGCGAT2360.14926317120991714No Hit
GGAAGTAAAAGTCGTAACAAGGCGATCGGACAGTTTGACCTGTTCGGTGC2130.1347163367275947No Hit
GGAAGTAAAAGTCGTAACAAGGGCAGAAGGAATTCAGAAGAGCCAGGGTG1970.12459679969641388No Hit
GGAAGTAAAAGTCGTAACAAGGCACTGGAAGGTTCAGGCTGCCCACAATC1750.11068243627854026No Hit
GGAAGTAAAAGTCGTAACAAGGAGGAGACGTGACTGACAAGTCCAAGAAG1700.10752008095629625No Hit
GGAAGTAAAAGTCGTAACAAGGAGGGGAGGTGTGGGCATCCAGGAGATAT1670.10562266776294985No Hit
GGAAGTAAAAGTCGTAACAAGGTGAACTGCTCATACACCTGGGCCTACGC1620.10246031244070584No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)