FastQCFastQC Report
Sun 21 May 2023
EGAF00007833316

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007833316
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences66907
Sequences flagged as poor quality0
Sequence length235-238
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGGGCAAACT1692325.29331759008773No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT1146417.13423109689569No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG62769.380184435111422No Hit
GCTGCGTTCTTCATCGATGCTGTTTAATTTTTCAAGAACGAGTTCGTAAT42506.352100677059201No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATCAAAATAA35285.272990867921144No Hit
GCTGCGTTCTTCATCGACGACAGTCTCGACTATCTCGAGCGAATCGACGA16252.428744376522636No Hit
GCTGCGTTCTTCATCGATGTTGTCGTAGGCTGCGTCCTCAATAAGCCATT14932.231455602552797No Hit
GCTGCGTTCTTCATCGATGAGTGACTGTTGGGCCCCACTGCTGCGACTCT14852.2194987071606858No Hit
GCTGCGTTCTTCATCGAAGAAAGGCACTGGTAGGCCTAAGTGGACTTGAA11201.6739653548956013No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG9261.384010641636899No Hit
GCTGCGTTCTTCATCGACTCTTACTACCTAGGCATCCTTTGTGTGCCCTT6851.023809167949542No Hit
GCTGCGTTCTTCATCGATGCGTTTTTGTTCTCTGTTTTTTTCTTTACGCT6801.0163361083294722No Hit
GCTGCGTTCTTCATCGATGCCGTTTCCGAGGCCGGACGATCGGGCAAACT6510.9729923625330683No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAAGCCGGACGATCGGGCAAACT6140.9176917213445528No Hit
GCTGCGTTCTTCATCGATGCTACCCTTATCTGCAGCAGCTGGAATCTCTG5570.8324988416757588No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT5560.831004229751745No Hit
GCTGCGTTCTTCATCGATGCCATCTGGCCATGGTTGAGGAGGGTGGGAGC4850.7248867831467559No Hit
GCTGCGTTCTTCATCGATGCCCCTTCCTTCCCATGCCTTAGCTTCCTCCT4710.7039622162105609No Hit
GCTGCGTTCTTCATCGATGCACGAGCCGAGTGATCCACCGCTAAGAGTCG3730.5574902476571958No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCATTGTTGAAAGTTT3660.5470279641890983No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCCGTTGCCGAGAGTCG3470.5186303376328336No Hit
GCTGCGTTCTTCATCGGCGCAGTCCTTGTCATTTACTACAAACAAATTTC2900.43343745796403965No Hit
GCTGCGTTCTTCATCGATGCACACAGGAGCTCAGAATATACCTAGTGAAG2370.3542230259913014No Hit
GCTGCGTTCTTCATCGGCGCGGTGCTTGTCATTTACTACAAACAAATTTC2310.3452553544472178No Hit
GCTGCGTTCTTCATCGATGCCTATCACACCATTTAAGATGTTTTCCTGTG2290.3422661305991899No Hit
GCTGCGTTCTTCATCGATGCTCATCAGGGATATTGGCCTAAAATTTTCTT2040.30490083249884165No Hit
GCTGCGTTCTTCATCGATGCCCGCGTGCCTGTTCATCGCTACGAGGTGCT1970.2944385490307442No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGATATCCGTTGTTAAGAGTCG1830.27351398209454914No Hit
GCTGCGTTCTTCATCGATGCTGCTCAAAGCATTTCCTAGACACCAGCTTG1510.22568640052610342No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGTCCGGACGATCGGGCAAACT1490.22269717667807556No Hit
GCTGCGTTCTTCATCGAAACGGATATAACTACCATCTTTTCTTCTGGTCT1460.21821334090603375No Hit
GCTGCGTTCTTCATCGATGCATATGTGGTGTGGCCCACATTTCTGTATGC1410.21074028128596412No Hit
GCTGCGTTCTTCATCGATGCCAGTTGGCGCGTAAACACTGTGATGTCTTC1410.21074028128596412No Hit
GCTGCGTTCTTCATCGATGCGCACACTACTCCCACCGCCCCCGAGTGCCT1340.20027799781786657No Hit
GCTGCGTTCTTCATCGATGCCAGTTGGCGGGTGAATATTGTAATGTCTTC1320.1972887739698387No Hit
GCTGCGTTCTTCATCGATGACAGTCTCGACTATCTCGAGCGAATCGACGA1290.19280493819779695No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTAAAAGTTT1260.18832110242575514No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCGTTGTTGAAAGTTT1160.17337498318561587No Hit
GCTGCGTTCTTCATCGATGCCAAATATACCGCTGTATCTATACTCCCCCC1140.17038575933758798No Hit
GCTGCGTTCTTCATCGATGCTGTCGTAGGCTGCGTCCTCAATAAGCCATT970.1449773566293512No Hit
GCTGCGTTCTTCATCGATGCCCAAGAGGTCGGGGACAAGATCCCCCAGTG950.14198813278132333No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCTGGCAAACT950.14198813278132333No Hit
GCTGCGTTCTTCATCGATGCCGCCAAAATCGGCAGGGAACTGGGCTGGAA890.13302046123723976No Hit
GCTGCGTTCTTCATCGATGCCATATATTTGCTTATCACAGCCAGCACTGG890.13302046123723976No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGATGCCGGACGATCGGGCAAACT870.1300312373892119No Hit
GCTGCGTTCTTCATCGATGCCGAAGATCATGACTTCGGGCTAAGACGCCT810.12106356584512831No Hit
GCTGCGTTCTTCATCGATGCTCATTATCTTTTTTTTTTGGTAATAGTTAT810.12106356584512831No Hit
GCTGCGTTCTTCATCGATGCAGGTATCGAGCATGCCCTCAAGGCCTTCGA790.11807434199710046No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACTATCGGGCAAACT750.11209589430104473No Hit
GCTGCGTTCTTCATCGATGCCATGAATCCCTGCAGATATCCAACCAGCTC720.10761205852900294No Hit
GCTGCGTTCTTCATCGATGCCTTTCGACATCCGCGTCCCACCTTTCGTGC700.10462283468097508No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCATTGTTAAAAGTTT690.10312822275696115No Hit
GCTGCGTTCTTCATCGATGCGGATACGCTGAGCACCGTGACGCCGGACAA690.10312822275696115No Hit
GCTGCGTTCTTCATCGATGCGACGTAACACAAGGTCGATACCTTTTTCTC690.10312822275696115No Hit
GCTGCGTTCTTCATCGATGCCCAGCGTGAGCTGCATGATGACGAGCTTCT690.10312822275696115No Hit
GCTGCGTTCTTCATCGATGCGGTGCTTGTCATTTACTACAAACAAATTTC680.10163361083294722No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCATTGCCGAGAGTCG680.10163361083294722No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTGAAAGTTG670.10013899890893328No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)