FastQCFastQC Report
Sun 21 May 2023
EGAF00007833327

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007833327
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences68820
Sequences flagged as poor quality0
Sequence length247-250
%GC52

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGAAGTAAAAGTCGTAACAAGGTTTCTGTAGGTGAACCTGCAGAAGGATC2672138.82737576285963No Hit
GGAAGTAAAAGTCGTAACAAGGAACGAAGATGAAGGACACCTCTCCGGCA2662338.68497529787852No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATC63509.22696890438826No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTAGGGGAACCTGCGGCTGGATC13651.983435047951177No Hit
GGAAGTAAAAGTCGTAACAAGGGGGCTGTTGCGGGCAGGTGTCGTTTTGT8801.2786980528916014No Hit
GGAAGTAAAAGTCGTAACAAGGACATTCAAAAGGGGAGCGCGCGGAAGTG8691.2627143272304564No Hit
GGAAGTAAAAGTCGTAACAAGGAGGAGATCCAGTCGAGCATCTCTCGACG3770.5478058703865155No Hit
GGAAGTAAAAGTCGTAACAAGGACGAGGTGGACATCCGCGTGGCGATCAG2500.36326649229875035No Hit
GGAAGTAAAAGTCGTAACAAGGAAGGAGCATATATGATTCAGCAGGAAAC2480.36036036036036034No Hit
GGAAGTAAAAGTCGTAACAAGGTATCCGTACGGGAACGTGCGGATGGATC2430.35309503051438534No Hit
GGAAGTAAAAGTCGTAACAAGGGCTGGCAGGGGCTGTGGGAGGAGTTTGT2180.3167683812845103No Hit
GGAAGTAAAAGTCGTAACAAGGAACGAAGATGAAGGAAACCTCTCCGGCA1870.27172333623946526No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTATCGGAAGGTGCGGCTGGATC1790.2600988084859053No Hit
GGAAGTAAAAGTCGTAACAAGGTATCGCAGATTTCCAATGCCTGCTCGCC1710.24847428073234523No Hit
GGAAGTAAAAGTCGTAACAAGGTCTCCGTAGGTGAACCTGCGGAGGGATC1570.2281313571636152No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCTGTAGGTGAACCTGCGGAAGGATC1400.2034292356873002No Hit
GGAAGTAAAAGTCGTAACAAGGTCTCCGTTGGTGAACCAGCGGAGGGATC1350.1961639058413252No Hit
GGAAGTAAAAGTCGTAACAAGGTGTCGCAGATTTCCAATGCCTGTTCGCC1290.18744551002615517No Hit
GGAAGTAAAAGTCGTAACAAGGAACGAAGATGAAGGACAACTCTCCGGCA1130.16419645451903517No Hit
GGAAGTAAAAGTCGTAACAAGGCACACCACGGCAGACCACACCCGGGCAG1130.16419645451903517No Hit
GGAAGTAAAAGTCGTAACAAGGTATCGCAGATTTCTAATGCCTGTTCGCC690.10026155187445511No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)