FastQCFastQC Report
Sun 21 May 2023
EGAF00007833337

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007833337
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences80415
Sequences flagged as poor quality0
Sequence length247-250
%GC53

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGAAGTAAAAGTCGTAACAAGGAACGAAGATGAAGGACACCTCTCCGGCA3476543.231984082571664No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATC2716433.779767456320336No Hit
GGAAGTAAAAGTCGTAACAAGGACATTCAAAAGGGGAGCGCGCGGAAGTG25373.1548840390474413No Hit
GGAAGTAAAAGTCGTAACAAGGAGCTCCAGGACATCATCGCCCTGATCGG6650.8269601442516943No Hit
GGAAGTAAAAGTCGTAACAAGGCTCAAGTTGAAAAACGCTTGAACCAAGT5670.7050923335198657No Hit
GGAAGTAAAAGTCGTAACAAGGTCGAGCAGAACAAGCTCACCGTCACGGG5140.6391842317975502No Hit
GGAAGTAAAAGTCGTAACAAGGAAAGTAAACTGAATCCGAAAAGAGCACA5000.6217745445501461No Hit
GGAAGTAAAAGTCGTAACAAGGACAGGAAGGGCTTTGCCATCATCGATCC4930.6130697009264441No Hit
GGAAGTAAAAGTCGTAACAAGGACTACAGAAAGAAACAGGGTCACAGACA4680.5819809736989368No Hit
GGAAGTAAAAGTCGTAACAAGGAAGGAGCATATATGATTCAGCAGGAAAC4060.5048809301747187No Hit
GGAAGTAAAAGTCGTAACAAGGAAAGAAAACAGAATCCGAAAAGAGCACA3960.4924454392837157No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGAGGAAGGATC3840.4775228502145122No Hit
GGAAGTAAAAGTCGTAACAAGGCTAAGAAGGACTACAGAAAGAAACAGGG3570.4439470248088043No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTATCGGAAGGTGCGGCTGGATC3480.43275508300690174No Hit
GGAAGTAAAAGTCGTAACAAGGAGGATCTTAGCACATGCACATAGAAACA3470.43151153391780145No Hit
GGAAGTAAAAGTCGTAACAAGGAGGAAGTAGGCCAAGTTGAGCAGGATAT3010.37430827581918796No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCTGAAGGATC2990.3718211776409874No Hit
GGAAGTAAAAGTCGTAACAAGGTCTCCGTTGGTGAACCAGCGGAGGGATC2870.35689858857178386No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTACCGGAAGGTGCGGCTGGATC2870.35689858857178386No Hit
GGAAGTAAAAGTCGTAACAAGGTATCCGTACGGGAACGTGCGGATGGATC2550.31710501772057453No Hit
GGAAGTAAAAGTCGTAACAAGGAACGAAGATGAAGGACACCTCTCCGGAA2490.3096437231859728No Hit
GGAAGTAAAAGTCGTAACAAGGAGGAACCAACATGACTGATGAAGAAAAA2420.3009388795622707No Hit
GGAAGTAAAAGTCGTAACAAGGGCCAGCCAGGGAGAGGTCTCCCCAGGCC2330.2897469377603681No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTACCGGAAGGTGCGGCTGGAAC2280.2835291923148666No Hit
GGAAGTAAAAGTCGTAACAAGAAAAGGCAGATGCTAGAGAATCATCTCGT2230.27731144686936515No Hit
GGAAGTAAAAGTCGTAACAAGGAGAGAGACGATGAGCGTTGATGCAGCGT2080.2586582105328608No Hit
GGAAGTAAAAGTCGTAACAAGGAAAGGAAACAGAATCCGAAAAGAGCACA1980.24622271964185785No Hit
GGAAGTAAAAGTCGTAACAAGCGGCAAGAAGAATACAATCAACACTTGAC1930.24000497419635639No Hit
GGAAGTAAAAGTCGTAACAAGGCTATGTAAAAAATGACGGTAATAATGGT1900.2362743269290555No Hit
GGAAGTAAAAGTCGTAACAAGGATACCCGTGTTGGCGACATGATGCTCGT1890.2350307778399552No Hit
GGAAGTAAAAGTCGTAACAAGGTAAGGTGTTAGAGCACGAAGCGAAACCT1630.20269850152334762No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAATGATC1550.1927501088105453No Hit
GGAAGTAAAAGTCGTAACAAGGTCTCCGTAGGTGAACCTGCGGAGGGATC1500.18653236336504384No Hit
GGAAGTAAAAGTCGTAACAAGGACAACTGGAAGCAGTACATCGACGGACT1500.18653236336504384No Hit
GGAAGTAAAAGTCGTAACAAGGTTTTCGTAGGTGAACCTGCGGAAGGATC1430.17782751974134178No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAAACTGCGGAAGGATC1250.15544363613753653No Hit
GGAAGTAAAAGTCGTAACAAGGGAGGCGGAGATGAGCGGAGTCTTGTATC1170.1454952434247342No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGTAAGGATC1160.1442516943356339No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCAGAAGGATC1140.1417645961574333No Hit
GGAAGTAAAAGTCGTAACAAGGCCCGAGAGGACCTTCTCATCCGCAATGG1110.13803394889013243No Hit
GGAAGTAAAAGTCGTAACAAGGCTTTGGAGTAGACCATTTAGTGAATGGA1080.13430330162283155No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCCTTAGGTGAACCTGCGGAAGGATC910.1131629671081266No Hit
GGAAGTAAAAGTCGTAACAAGGAACGAAGATGAAGGACAACTCTCCGGCA870.10818877075172544No Hit
GGAAGTAAAAGTCGTAACAACAGGGGAGCGGTCAGCTAATCGACGCAATC850.10570167257352484No Hit
GGAAGTAAAAGTCGTAACAAGGAACTCTTAAAGAAGTTGGTAATCATCAT820.10197102530622396No Hit
GGAAGTAAAAGTCGTAACAAGAGCAGAAGGAATTCAGAAGAGCCAGGGTG810.10072747621712368No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)