FastQCFastQC Report
Sun 21 May 2023
EGAF00007833358

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007833358
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences121657
Sequences flagged as poor quality0
Sequence length237-238
%GC64

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG7607462.53154360209441No Hit
GCTGCGTTCTTCATCGATGCCAGTTGGCGGGTGAATACTGTAATGTCTTC1511912.427562737861365No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT85757.048505223702706No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG39953.283822550284817No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCCGTTGCCGAGAGTCG15811.2995553071339916No Hit
GCTGCGTTCTTCATCGATGCCAGTTGGCGGGTGAACACTGTAATGTCTTC15781.297089357784591No Hit
GCTGCGTTCTTCATCGATGCCGTTTCCGAGGCCGGACGATCGGGCAAACT12711.0447405410292872No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTAAAAGTTT7920.651010628241696No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT6750.5548386036150817No Hit
GCTGCGTTCTTCATCGATGCCGAGCATGCTTTTGACCCGATTTACGCCCG4640.3814001660405895No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCTAGATATCCGTTGCCGGGAGTCG4550.3740023179923884No Hit
GCTGCGTTCTTCATCGATGCCCGCATGCCTGTTCGTCGCTACGAGGTGCT3510.2885160738798425No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCATTGTTGAAAGTTT3050.2507048505223703No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATCAAAATAA2890.23755312065890163No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCTGTTGCCGAGAGTCG2640.21700354274723196No Hit
GCTGCGTTCTTCATCGACTCTTACTACCTAGGCATCCTTTGTGTGCCCTT2500.20549577911669692No Hit
GCTGCGTTCTTCATCGATGCCGTCTATTTCGATAGGTTTCTCCATCACTT2280.18741215055442761No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGGGCAAACT2230.1833022349720937No Hit
GCTGCGTTCTTCATCGATGCGTAGACAGACGAAGCACAGCCAAGTAGCAG1770.14549101161462144No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCC1730.1422030791487543No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGATATCCGTTGCCGAGAGTCG1710.1405591129158207No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCT1690.13891514668288713No Hit
GCTGCGTTCTTCATCGATGTGAGAGCCGAGATATCCGTTGCCGAGAGTCG1680.13809316356642035No Hit
GCTGCGTTCTTCATCGATTCGAGAGCCGAGATATCCGTTGCCGAGAGTCG1660.1364491973334868No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGATATATCCGTTGCCGAGAGTCG1460.12000953500415101No Hit
GCTGCGTTCTTCATCGATGCAGCTGTCGGTAAGCTGCGTTCTTCATCGAT1440.11836556877121744No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCATTGTTAAAAGTTT1390.11425565318888349No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCGTTGTTGAAAGTTT1370.11261168695594992No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCA1330.10932375449008278No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCTTTGCCGAGAGTCG1240.10192590644188168No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTTCCGAGAGTCG1230.10110392332541489No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)