FastQCFastQC Report
Sun 21 May 2023
EGAF00007833370

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007833370
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences65538
Sequences flagged as poor quality0
Sequence length235-238
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGGGCAAACT3734656.98373462723916No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT1016115.503982422411426No Hit
GCTGCGTTCTTCATCGACGACAGTCTCGACTATCTCGAGCGAATCGACGA22443.4239677744209467No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG21113.2210320729958193No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAAGCCGGACGATCGGGCAAACT12711.9393329061002778No Hit
GCTGCGTTCTTCATCGATGCCGTTTCCGAGGCCGGACGATCGGGCAAACT12551.9149195886356007No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG7811.1916750587445453No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGATGCCGGACGATCGGGCAAACT3880.5920229485184167No Hit
GCTGCGTTCTTCATCGAAGAAAGGCACTGGTAGGCCTAAGTGGACTTGAA3870.5904971161768745No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT3790.578290457444536No Hit
GCTGCGTTCTTCATCGATGGGAGAACCAAGAGATCCGTTGTCGAAAGTTG3700.5645579663706551No Hit
GCTGCGTTCTTCATCGATGCTTTTCAGTGCGTGCCCTTCGCACATCTGCG3150.48063718758582813No Hit
GCTGCGTTCTTCATCGAGGTCGATGAAGGAGTCATAGCGCTCGGAGCGCA2890.440965546705728No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCTAGGCCGGACGATCGGGCAAACT2530.38603558241020475No Hit
GCTGCGTTCTTCATCGACTCTTACTACCTAGGCATCCTTTGTGTGCCCTT2420.36925142665323935No Hit
GCTGCGTTCTTCATCGACTCTTGGTGCCAAGGCATCCGCCTTACGCCCTT2360.3600964326039855No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGGTCAAACT2250.34331227684702004No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCTGACGATCGGGCAAACT2110.3219506240654277No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACTATCGGGCAAACT1760.26854649211144677No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCTGGCAAACT1700.2593914980621929No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCCGTTGCCGAGAGTCA1620.24718483932985444No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGATATCCGTTGTTAAGAGTCG1620.24718483932985444No Hit
GCTGCGTTCTTCATCGATGACAGTCTCGACTATCTCGAGCGAATCGACGA1570.2395556776221429No Hit
GCTGCGTTCTTCATCGATGCAGCCAAAGGAACGTTGACCACCGACAAAAT1380.21056486313283895No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGTCCGGACGATCGGGCAAACT1350.20598736610821203No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGTGCAAACT1340.20446153376666973No Hit
GCTGCGTTCTTCATCGACTCTTACTACCAAGGCATCCTTTGTGTGCCCTT1330.2029357014251274No Hit
GCTGCGTTCTTCATCGATGTCGATGAAGGAGTCATAGCGCTCGGAGCGCA1170.17852238396045042No Hit
GCTGCGTTCTTCATCGATGCCCCTTCCTTCCCATGCCTTAGCTTCCTCCT1040.1586865635204004No Hit
GCTGCGTTCTTCATCGATGCAAGGGATGAAGCTCTCTTTTTGTCTCTTTC1020.15563489883731577No Hit
GCTGCGTTCTTCATCGAAACGGATATAACTACCATCTTTTCTTCTGGTCT1010.15410906649577344No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGGACAAACT940.14342824010497726No Hit
GCTGCGTTCTTCATCGATGTCGCTTCCGAGGCCGGACGATCGGGCAAACT890.1357990783972657No Hit
GCTGCGTTCTTCATCGATGCTAGAGCCGAGATATCCGTTGCCGAGAGTCG870.13274741371418108No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCCGACGATCGGGCAAACT870.13274741371418108No Hit
GCTGCGTTCTTCATCGATGCGTATGCCAAACGCCACGGTTTCGAGGCCGG820.12511825200646953No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCGTTGTTGAAAGTTT810.12359241966492722No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTG780.11901492264030028No Hit
GCTGCGTTCTTCATCGATGCTCATGGGCGACGATGTAGCTCCTCGCCGTG780.11901492264030028No Hit
GCTGCGTTCTTCATCGATGCGTTTTTGTTCTCTGTTTTTTTCTTTACGCT770.11748909029875797No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGTACGATCGGGCAAACT760.11596325795721565No Hit
TCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGGGCAAACT760.11596325795721565No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTT720.10985992859104642No Hit
GCTGCGTTCTTCATCGATTCCGCTTCCGAGGCCGGACGATCGGGCAAACT700.10680826390796179No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)