FastQCFastQC Report
Sun 21 May 2023
EGAF00007833378

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007833378
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences110835
Sequences flagged as poor quality0
Sequence length236-238
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG3114128.096720350069926No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT1598114.418730545405332No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG1272311.479225876302612No Hit
GCTGCGTTCTTCATCGATGCTTTTCAGTGCGTGCCCTTCGCACATCTGCG51214.620381648396265No Hit
GCTGCGTTCTTCATCGATGCCAGGCAAACAAAGGAACAACACATGCGTGT44484.013172734244598No Hit
GCTGCGTTCTTCATCGATGGGAGAACCAAGAGATCCGTTGTCGAAAGTTG28462.567780935625028No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTAAAAGTTT25132.267334325799612No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT20091.812604321739523No Hit
GCTGCGTTCTTCATCGAAACGGATATAGCTTCCGTCTTTTCTTCTTGTTT16841.5193756484864889No Hit
GCTGCGTTCTTCATCGACTCTTACTACCTAGGCATCCTTTGTGTGCCCTT16101.452609735191952No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATCAAAATAA16011.444489556548022No Hit
GCTGCGTTCTTCATCGATGCCGATTTGTTTCTCAAAATCACCCTGACCAT10740.9690079848423332No Hit
GCTGCGTTCTTCATCGATGAGTGACTGTTGGGCCCCACTGCTGCGACTCT10420.9401362385528036No Hit
GCTGCGTTCTTCATCGATGCGGTCGTCGCAGGCCAAACTGAGGCGGATCA7760.7001398475210899No Hit
GCTGCGTTCTTCATCGACACGAGAGCCAAGATATCCATTGCCAGGAGTCA6750.6090133982947624No Hit
GCTGCGTTCTTCATCGATGCTGTCCGATGTTACGGTAGTGGGCGTCTTCA6060.5467586953579646No Hit
GCTGCGTTCTTCATCGATGCGTTCAGGTGTACGGCTGCGTTCTTCATCGA6020.5431497270717733No Hit
GCTGCGTTCTTCATCGATGCCGATATGTTTCTCAAAATCACCCTGACCAT5010.45202327784544594No Hit
GCTGCGTTCTTCATCGATGCTGTCTCAAACAGCGAAGTGGAGAATAAGGA4700.42405377362746427No Hit
GCTGCGTTCTTCATCGATGCGCCCTCAAAACTAGACAATGCAAAACTTGG4690.42315153155591645No Hit
GCTGCGTTCTTCATCGATGCGTTCAGGTGTACGGCTGCGTTCTTCATCGG4250.38345288040781345No Hit
GCTGCGTTCTTCATCGATGTCTTCCTTTGTAGCATCAGCCGGGAAAGTCA3740.3374385347588758No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCGTTGTTGAAAGTTT3530.31849145125637207No Hit
GCTGCGTTCTTCATCGATGCCCGTGGTGATGGTTACGGTTACATTCACCG3370.3040555781116074No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCATTGCCGAGAGTCG3320.29954436775386833No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGATATCCGTTGCCGAGAGTCG2980.26886813732124326No Hit
GCTGCGTTCTTCATCGATGCGCGTGCTGCGTCTAAGGGTTCGATGCGCGT2910.2625524428204087No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCATTGTTGAAAGTTT2820.2544322641764785No Hit
GCTGCGTTCTTCATCGATGCAGGTTTGGATTCGGCGGTGTGCGCTGTTGC2770.24992105381873958No Hit
GCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGAAAGTTT2740.24721432760409617No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCTGTTGCCGAGAGTCG2670.2408986331032616No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCTTTGCCGAGAGTCG2500.22556051788694909No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTG2410.21744033924301892No Hit
GCTGCGTTCTTCATCGATGCACGAGCCGAGTGATCCACCGCTAAGAGTCG2310.20841791852754094No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCAAGAGTCG2230.2011999819551586No Hit
GCTGCGTTCTTCATCGATGCCCCTTCCTTCCCATGCCTTAGCTTCCTCCT2220.20029773988361077No Hit
GCTGCGTTCTTCATCGATGCTCGATGCCGCGCCGTCGTCACCTCCGATGC2200.1984932557405152No Hit
GCTGCGTTCTTCATCGATAAAGTCGAGAGAAATTTGCGCCTGTCCGAGGT2170.1957865295258718No Hit
GCTGCGTTCTTCATCGATGCGGAGCTTGACGTCGCGTGGGCAGATCATCC2120.1912753191681328No Hit
GCTGCGTTCTTCATCGATGCACACAGGAGCTCAGAATATACCTAGTGAAG2090.1885685929534894No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCCATTGCCGAGAGTCG2010.18135065638110703No Hit
GCTGCGTTCTTCATCGATTCGAGAGCCGAGATATCCGTTGCCGAGAGTCG2000.18044841430955924No Hit
GCTGCGTTCTTCATCGATGCTGTGCTTAACAGCAAAGTGGAGAATAAGGA1940.17503496188027248No Hit
GCTGCGTTCTTCATCGTTTCGAAACGCCTAGGCATCCGCCGTATGCCCTT1840.1660125411647945No Hit
GCTGCGTTCTTCATCGATGCCAGTTGGCGCGTAAACACCGTGATGTCTTC1840.1660125411647945No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCATTGTTGAAAGTTG1830.1651102990932467No Hit
GCTGCGTTCTTCATCGATGTGAGAGCCGAGATATCCATTGCCGAGAGTCG1820.16420805702169894No Hit
GCTGCGTTCTTCATCGACGACAGTCTCGACTATCTCGAGCGAATCGACGA1800.16240357287860333No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTG1690.15247891009157757No Hit
GCTGCGTTCTTCATCGATGCGTTCAGGTGTACCGCTGCGTTCTTCATCGA1660.14977218387693417No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCCGTTGCCGAGAGTCA1630.1470654576622908No Hit
GCTGCGTTCTTCATCGATGCGTTTTTGTTCTCTGTTTTTTTCTTTACGCT1630.1470654576622908No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGATTCG1620.146163215590743No Hit
GCTGCGTTCTTCATCGATGCGTTCAGGTGTACCGCTGCGTTCTTCATCGG1620.146163215590743No Hit
GCTGCGTTCTTCATCGATGCCGCAATGGTAGGGCATTTAGGCTCAGCAGC1580.1425542473045518No Hit
GCTGCGTTCTTCATCGGCGCTTACTACCTAGGCATCCTTTGTGTGCCCTT1550.13984752108990842No Hit
GCTGCGTTCTTCATCGATGCTGTCTCAAACAGCAAAGTGGAGAATAAGGA1540.13894527901836062No Hit
GCTGCGTTCTTCATCGATGGGAGAACCAAGAGATCCGTTGCCAAAAGTTG1510.13623855280371724No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTTG1500.13533631073216945No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCA1470.13262958451752607No Hit
GCTGCGTTCTTCATCGATGCGAGAGCTGAGATATCCGTTGCCGAGAGTCG1450.13082510037443046No Hit
GCTGCGTTCTTCATCGATGCGTTCAGGTGTACTGCTGCGTTCTTCATCGG1430.12902061623133487No Hit
GCTGCGTTCTTCATCGATGCTATCCCGGACGACTCCATCATCGCCCAATA1410.12721613208823926No Hit
GCTGCGTTCTTCATCGCAGCGACAGCCGTGAGCGCAGCGCCGTAGACATT1410.12721613208823926No Hit
GCTGCGTTCTTCATCGATGCGTTCAGGTGTACTGCTGCGTTCTTCATCGA1380.12450940587359588No Hit
GCTGCGTTCTTCATCGATGCGTTCAGGTGTACAGCTGCGTTCTTCATCGG1330.11999819551585691No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGTCGAGAGTCG1300.11729146930121352No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCCGTTGCCGAGAGTCG1300.11729146930121352No Hit
GCTGCGTTCTTCATCGATGCTGTTTAATTTTTCAAGAACGAGTTCGTAAT1210.10917129065728334No Hit
GCTGCGTTCTTCATCGATGCCAATCGCTCTGGGCCTGAGCCGACCGGCAC1170.10556232237109217No Hit
GCTGCGTTCTTCATCGATTTCACCCAACAATGCTTCAGGAGAAACGACAA1150.10375783822799657No Hit
GCTGCGTTCTTCATCGATGCGTTCAGGTGTACAGCTGCGTTCTTCATCGA1110.10014886994180539No Hit
GCTGCGTTCTTCATCGATGCGGCCGCCGTTCCCGCCGCGTCGTGTGTGGC1110.10014886994180539No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)