FastQCFastQC Report
Sun 21 May 2023
EGAF00007833380

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007833380
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences122442
Sequences flagged as poor quality0
Sequence length235-238
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGCCGATATGTTTCTCAAAATCACCCTGACCAT2273318.566341614805378No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG107188.75353228467356No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATCAAAATAA89677.323467437643946No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCATTGTTAAAAGTTG80296.557390437921629No Hit
GCTGCGTTCTTCATCGATGAGTGACTGTTGGGCCCCACTGCTGCGACTCT78416.403848352689437No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT69265.656555757011484No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTAAAAGTTT43943.5886378856928176No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG41363.3779258751082146No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTG37773.084725829372274No Hit
GCTGCGTTCTTCATCGATGCCATCTGGCCATGGTTGAGGAGGGTGGGAGC33862.765390960618088No Hit
GCTGCGTTCTTCATCGAAGAAAGGCACTGGTAGGCCTAAGTGGACTTGAA30652.5032260172163143No Hit
GCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCATTGTTGAAAGTTG22721.8555724342954216No Hit
GCTGCGTTCTTCATCGATGCCGATTTGTTTCTCAAAATCACCCTGACCAT19081.5582888224628804No Hit
GCTGCGTTCTTCATCGATGCACGAGCCGAGTGATCCACCGCTAAGAGTCG18331.4970353310138678No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCATTGTTGAAAGTTT16151.3189918492020714No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT15021.2267032554188924No Hit
GCTGCGTTCTTCATCGATGCACTGCGCAAGAAGGAGGCGAAAACATGGCT11900.9718887309909998No Hit
GCTGCGTTCTTCATCGACTCTTACTACCTAGGCATCCTTTGTGTGCCCTT10330.8436647555577335No Hit
GCTGCGTTCTTCATCGATGCCCAGTGAAGTGCAGCGGGCAGCATCGGTCA9580.7824112641087209No Hit
GCTGCGTTCTTCATCGATGCCCGCCGCGTGCCATGACCCTCGGCTTTGCG9090.7423923163620326No Hit
GCTGCGTTCTTCATCGTTTCGAAACGCCTAGGCATCCGCCGTATGCCCTT7650.6247856127799285No Hit
GCTGCGTTCTTCATCGATGCCCACGCAGGCAACGGCTTTTTCAGCGGCCA6880.5618986948922755No Hit
GCTGCGTTCTTCATCGATGCTAGGTTTTTTACTTCTTCTTTTGCTTCAGC6270.5120791885137452No Hit
GCTGCGTTCTTCATCGATGCCCACGCCGGTACGCTCGGCACGCTCGGCGC6130.5006452034432629No Hit
GCTGCGTTCTTCATCGATGCCCCTTCCTTCCCATGCCTTAGCTTCCTCCT5920.4834942258375394No Hit
GCTGCGTTCTTCATCGATGCCAAGGCGTATGATCGGCGCACCGGGATGTG5760.4704268143284167No Hit
GCTGCGTTCTTCATCGATGCTGGAGCCAAGAGATCCGTTGTTGAAAGTTT5450.4451087045294915No Hit
GCTGCGTTCTTCATCGATGCACACAGGAGCTCAGAATATACCTAGTGAAG5300.432858006239689No Hit
GCTGCGTTCTTCATCGATGCCAGTTGGCGCGTAAACACTGTGATGTCTTC4860.39692262458960165No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTG4750.38793877917707975No Hit
GCTGCGTTCTTCATCGATGCTTTTCAGTGCGTGCCCTTCGCACATCTGCG4630.37813822054523777No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCGTTGTTGAAAGTTT4380.35772039006223355No Hit
GCTGCGTTCTTCATCGATGCAAACCTCGGCCGCACCCCAAGGCCTTGCTG4260.3479198314303915No Hit
GCTGCGTTCTTCATCGATGCAACACCGACGACTATCCGCAGCTCGCACGT4200.3430195521144705No Hit
GCTGCGTTCTTCATCGATGCTATTGTCCACAGTATCCGCTATCCAAAATA3890.3177014423155453No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTCGAAAGTTG3520.2874830532006991No Hit
GCTGCGTTCTTCATCGATGCTAGGTTTTTTACTTCTTCTTTTGCTTCAAC3470.2833994871040983No Hit
GCTGCGTTCTTCATCGATGCATATGTGGTGTGGCCCACATTTCTGTATGC3090.2523643847699319No Hit
GCTGCGTTCTTCATCGATGCGTCTGAGAATTTCTCGGCTTCTACGGGAGC3050.2490975318926512No Hit
GCTGCGTTCTTCATCGATGCGGTCGTCGCAGGCCAAACTGAGGCGAATCA3030.24746410545401087No Hit
GCTGCGTTCTTCATCGATGCAAAGGGCGTGGTGCGTGGCGTTGGGAATGA2900.2368468336028487No Hit
GCTGCGTTCTTCATCGATGCCGAGCATGCTTTTGACCCGATTTACGCCCG2870.23439669394488818No Hit
GCTGCGTTCTTCATCGATGCCGAAGCCAAATGGCAGGTTTTGCCGCATTT2780.22704627497100666No Hit
GCTGCGTTCTTCATCGATGCCACCACCTCAATGCCATCTCGCTGATCTGG2370.1935610329788798No Hit
GCTGCGTTCTTCATCGAGGTCGATGAAGGAGTCATAGCGCTCGGAGCGCA2300.18784404044363862No Hit
GCTGCGTTCTTCATCGATGCGCCCTCAAAACTAGACAATGCAAAACTTGG2270.1853939007856781No Hit
GCTGCGTTCTTCATCGATGCCGACGCAGCCTCCGACTTGCAACAGTACAC2160.17641005537315627No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCATTGTTGAAAGTTG1960.16007579098675292No Hit
GCTGCGTTCTTCATCGATGCTCGCGTCCACTATGCAGTTCACAACCAACC1910.15599222489015208No Hit
GCTGCGTTCTTCATCGATGCCGGTGAATTATGCGATGGTGGTGGCGGCGG1890.15435879845151174No Hit
GCTGCGTTCTTCATCGATGGGAGAACCAAGAGATCCGTTGCCAAAAGTTG1880.15354208523219157No Hit
GCTGCGTTCTTCATCGATGCGTGACTGTTGGGCCCCACTGCTGCGACTCT1700.13884124728442857No Hit
GCTGCGTTCTTCATCGATGCAGGTTTGGATTCGGCGGTGTGCGCTGTTGC1700.13884124728442857No Hit
GCTGCGTTCTTCATCGGCGCTTACTACCTAGGCATCCTTTGTGTGCCCTT1690.13802453406510837No Hit
GCTGCGTTCTTCATCGATGTCTTCCTTTGTAGCATCAGCTGGGAAAGTCA1660.13557439440714789No Hit
GCTGCGTTCTTCATCGATGCTGACCAGCAGATCCATAACGCGTTATCTGC1630.13312425474918738No Hit
GCTGCGTTCTTCATCGATGCCACGCAGCGGGTATGGCTCTTCAACAAACA1570.12822397543326639No Hit
GCTGCGTTCTTCATCGATGCCCTCCGCGTGTCACGGCCCTCGGCTTTGCG1550.12659054899462605No Hit
GCTGCGTTCTTCATCGATGCCCGCCGCGTGTCACGGCCCTCGGCTTTGCG1540.12577383577530585No Hit
GCTGCGTTCTTCATCGATGCTTGTGCCTGCAGAGCCTCTCCAGGCTGCTG1460.11924013002074452No Hit
GCTGCGTTCTTCATCGATGCACTCAACAGTTGGCAACTTGTCAAGGAGCT1430.11678999036278401No Hit
GCTGCGTTCTTCATCGATGCACACATGGGGGCCACGTCAGGTGACCACTC1400.11433985070482351No Hit
GCTGCGTTCTTCATCGATGCCTATCACACCATTTAAGATGTTTTCCTGTG1320.10780614495026217No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCATTGTTAAAAGTTT1260.10290586563434115No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)