FastQCFastQC Report
Sun 21 May 2023
EGAF00007833412

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007833412
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences106666
Sequences flagged as poor quality0
Sequence length237-238
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGCCGTTTCCGAGGCCGGACGATCGGGCAAACT3778635.42459640372752No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG2185720.491065569159808No Hit
GCTGCGTTCTTCATCGATGAAGGCTTAGCTGCTGCGTTCTTCATCGATGA68806.4500403127519546No Hit
GCTGCGTTCTTCATCGATGCGAAGGCTTAGCTGCTGCGTTCTTCATCGAT64706.06566291039319No Hit
GCTGCGTTCTTCATCGATGCGTTGATATTCCACTTCGCAAATCAAAATAA46314.341589634935218No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATCAAAATAA30712.879080494253089No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT29062.7243920274501714No Hit
GCTGCGTTCTTCATCGATGAAGGCTTAGCTGCTGCGTTCTTCATCGGCTC25682.4075150469690434No Hit
GCTGCGTTCTTCATCGATGAAGGCTTAGCTGCTGCGTTCTTCATCGATGC22262.086888043050269No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGGGCAAACT18571.7409483809273807No Hit
GCTGCGTTCTTCATCGATGCGAAGGCTTAGCTGCTGCGTTCTTCATCGGC16131.5121969512309452No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG14981.4043837773986088No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAAGCCGGACGATCGGGCAAACT14471.356570978568616No Hit
GCTGCGTTCTTCATCGATGAGTGACTGTTGGGCCCCACTGCTGCGACTCT8960.8400052500328128No Hit
GCTGCGTTCTTCATCGATGAAGGCTTAGCTGCTGCGTTCTTCATCGCCCC4280.4012525078281739No Hit
GCTGCGTTCTTCATCGATGCGTCGTTATTCTACTTCGCAAATCAAAATAA3560.3337520859505372No Hit
GCTGCGTTCTTCATCGATGGGAGAACCAAGAGATCCGTTGTCGAAAGTTG3170.29718935743348396No Hit
GCTGCGTTCTTCATCGATGAAGGCTTAGCTGCTGCGTTCTTCATCGGCTG2770.2596891230570191No Hit
GCTGCGTTCTTCATCGATGCGAAGGCTTAGCTGCTGCGTTCTTCATCGCC2270.212813830086438No Hit
GCTGCGTTCTTCATCGATGCATATGTGGTGTGGCCCACATTTCTGTATGC2210.20718879492996833No Hit
GCTGCGTTCTTCATCGACTCTTACTACCTAGGCATCCTTTGTGTGCCCTT2210.20718879492996833No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCGTTGTTGAAAGTTT1790.16781354883468022No Hit
GCTGCGTTCTTCATCGATGCCCCTTCCTTCCCATGCCTTAGCTTCCTCCT1590.14906343164644778No Hit
GCTGCGTTCTTCATCGATGCACGAGCCGAGTGATCCACCGCTAAGAGTCG1570.14718841992762455No Hit
GCTGCGTTCTTCATCGATGAAGGCTTAGCTGCTGCGTTCTTCCTTTCATC1350.12656329102056887No Hit
GCTGCGTTCTTCATCGATGCCGCCAGGCAGACCGACGAAGATACCGAAAT1160.10875067969174808No Hit
GCTGCGTTCTTCATCGATGCCGCCGGGCAGACCGACAAAGATACCGAAAT1090.10218813867586674No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)