FastQCFastQC Report
Sun 21 May 2023
EGAF00007833418

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007833418
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences104130
Sequences flagged as poor quality0
Sequence length235-238
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT3665335.19927014309037No Hit
GCTGCGTTCTTCATCGATGTCTTCCTTTGTAGCATCAGCCGGGAAAGTCA98849.491981177374436No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCA90128.654566407375395No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT79837.666378565254969No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTAAAAGTTT42694.099683088447134No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCATTGTTGAAAGTTT33183.1864016133679054No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG33123.1806395851339673No Hit
GCTGCGTTCTTCATCGATGCTAGGTTTTTTACTTCTTCTTTTGCTTCAAC25872.4843945068664173No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCGTTGTTGAAAGTTT21182.0339959665802363No Hit
GCTGCGTTCTTCATCGATGCCGATTTGTTTCTCAAAATCACCCTGACCAT16421.5768750600211274No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAAGCCGGACGATCGGGCAAACT15891.525977143954672No Hit
GCTGCGTTCTTCATCGATGCCCGAACCAAGAGATCCGTTGTTGAAAGTTT11821.135119562085854No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG10090.968981081340632No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATCAAAATAA9170.8806299817535772No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTG7270.6981657543455296No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCCGTTGCCGAGAGTCA7000.6722366272928071No Hit
GCTGCGTTCTTCATCGATGCGACTGAGCAGTAGAACGTGTGGAGAATATC6250.6002112743685778No Hit
GCTGCGTTCTTCATCGATGCCGCCAGGCAGACCTACGAATACGCCGAAGT5620.5397099779122251No Hit
GCTGCGTTCTTCATCGATGCTGTCTCAAACAGCAAAGTGGAGAATAAGGA5260.505137808508595No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCATTGTTAAAAGTTT4810.4619225967540574No Hit
GCTGCGTTCTTCATCGATGCGGTCCGCCATCGCCCCGTCGGAGCCGACGA4780.4590415826370883No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGGGCAAACT3910.37549217324498224No Hit
GCTGCGTTCTTCATCGATGCTACCTCCTGATTCAAGTCCCGTAGCGACAC3800.36492845481609526No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCATTGTTGAAAGTTT3740.3591664265821569No Hit
GCTGCGTTCTTCATCGATGCCAGGCAAACAAAGGAACAACACACACGTGT3370.32363391913953715No Hit
GCTGCGTTCTTCATCGATGCTGTTTAATTTTTCAAGAACGAGTTCGTAAT2910.2794583693460098No Hit
GCTGCGTTCTTCATCGATGGGAGAACCAAGAGATCCGTTGTCGAAAGTTG2820.2708153269951023No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTGAAAGTTG2560.24584653798136943No Hit
GCTGCGTTCTTCATCGATGCGTTTTTGTTCTCTGTTTTTTTCTTTACGCT2500.24008450974743112No Hit
GCTGCGTTCTTCATCGATGCCGATATGTTTCTCAAAATCACCCTGACCAT2440.23432248151349275No Hit
GCTGCGTTCTTCATCGATACGAGAACCAAGAGATCCATTGTTAAAAGTTT2320.22279842504561606No Hit
GCTGCGTTCTTCATCGATGCTACCCTTATCTGCAGCAGCTGGAATCTCTG2250.216076058772688No Hit
GCTGCGTTCTTCATCGACTCTTACTACCTAGGCATCCTTTGTGTGCCCTT2210.2122347066167291No Hit
GCTGCGTTCTTCATCGATGGGAGAACCAAGAGATCCGTTGCCAAAAGTTG2140.20551234034380103No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTG2080.19975031210986266No Hit
GCTGCGTTCTTCATCGATGCCCCTTCCTTCCCATGCCTTAGCTTCCTCCT2060.19782963603188322No Hit
GCTGCGTTCTTCATCGATGCCAAGGATAATTTTAGACGCCCCACAGAGCG2040.19590895995390376No Hit
GCTGCGTTCTTCATCGATGCCTTCCTTTGTAGCATCAGCCGGGAAAGTCA1830.17574186113511955No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGATATCCGTTGTTAAGAGTCG1770.1699798329011812No Hit
GCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGAAAGTTT1720.1651781427062326No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTT1630.15653510035532509No Hit
GCTGCGTTCTTCATCGATGCTAGGTTTTTTACTTCTTCTTTTGCTTCAGC1430.1373283395755306No Hit
CCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT1410.13540766349755115No Hit
GCTGCGTTCTTCATCGATGCCATTGAAAGTATACCAATAGCTTTCTCTAT1360.1306059733026025No Hit
GCTGCGTTCTTCATCGATGCCGTTTCCGAGGCCGGACGATCGGGCAAACT1290.12388360702967445No Hit
GCTGCGTTCTTCATCGAAACGGATATAGCTTCCGTCTTTTCTTCTTGTTT1240.11908191683472583No Hit
GCTGCGTTCTTCATCGATGCCAAATATACCGCCGTATCTATACTCCCCCC1210.11620090271775665No Hit
GCTGCGTTCTTCATCGATGCTAGGCTTTTTACTTCTTCTTTTGCTTCAGC1180.11331988860078747No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTA1140.10947853644482858No Hit
TCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT1090.10467684624987997No Hit
GCTGCGTTCTTCATCGATGCTTGCCCAGTGCATCTGACCACTGACGAACA1070.10275617017190052No Hit
GCTGCGTTCTTCATCGATGCCCACGCCGGTACGCTCGGCACGCTCGGCGC1050.10083549409392106No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)