FastQCFastQC Report
Sun 21 May 2023
EGAF00007833430

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007833430
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences67207
Sequences flagged as poor quality0
Sequence length235-238
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG2381735.43827279896439No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG892713.282842561042749No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT52747.847396848542562No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATCAAAATAA35175.233085839272695No Hit
GCTGCGTTCTTCATCGATGCCGTTTCCGAGGCCGGACGATCGGGCAAACT30394.5218504024878365No Hit
GCTGCGTTCTTCATCGATGAGTGACTGTTGGGCCCCACTGCTGCGACTCT19432.8910678947133484No Hit
GCTGCGTTCTTCATCGATGCCAGGCAAACAAAGGAACAACACATGCGTGT14122.100971624979541No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGGGCAAACT10561.5712648980016963No Hit
GCTGCGTTCTTCATCGAAACGGATATAGCTTCCGTCTTTTCTTCTTGTTT7631.1352984064159983No Hit
GCTGCGTTCTTCATCGATGCTCCATGTTATATGGATTTCATAACTAATAC7361.0951240198193641No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT7081.05346169297841No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTAAAAGTTT5590.8317585965747616No Hit
GCTGCGTTCTTCATCGATGCTCATCAGGGATATTGGCCTAAAATTTTCTT5430.807951552665645No Hit
GCTGCGTTCTTCATCGACGACAGTCTCGACTATCTCGAGCGAATCGACGA5180.7707530465576502No Hit
GCTGCGTTCTTCATCGATGCCAGGCAAACAAAGGAACAACACACATGTGT4720.7023077953189399No Hit
GCTGCGTTCTTCATCGATTTCACCCAACAATGCTTCAGGAGAAACGACAA4200.624934902614311No Hit
GCTGCGTTCTTCATCGATGCACGAGCCGAGTGATCCACCGCTAAGAGTCG4180.6219590221256714No Hit
GCTGCGTTCTTCATCGATGCGTTTTTGTTCTCTGTTTTTTTCTTTACGCT3830.5698811135744788No Hit
GCTGCGTTCTTCATCGATGCCCCTTCCTTCCCATGCCTTAGCTTCCTCCT3260.48506851964825093No Hit
GCTGCGTTCTTCATCGACTCTTACTACCTAGGCATCCTTTGTGTGCCCTT3140.46721323671641346No Hit
GCTGCGTTCTTCATCGATGCACACAGGAGCTCAGAATATACCTAGTGAAG2570.38240064279018554No Hit
GCTGCGTTCTTCATCGATGCCATCTGGCCATGGTTGAGGAGGGTGGGAGC2290.3407383159492315No Hit
GCTGCGTTCTTCATCGACTCCCAAAACCACACACATGAAGTATGTGCGGT2250.3347865549719523No Hit
GCTGCGTTCTTCATCGATGCAACCAACCGTTCCGCTGCGTTCTTCATCGA1780.2648533634889223No Hit
GCTGCGTTCTTCATCGATGCGTGAGCCGAGATATCCGTTGCCGAGAGTCG1760.26187748300028274No Hit
GCTGCGTTCTTCATCGATGCCTATCACACCATTTAAGATGTTTTCCTGTG1710.25443778177868376No Hit
GCTGCGTTCTTCATCGATGCATATGTGGTGTGGCCCACATTTCTGTATGC1690.2514619012900442No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAAGCCGGACGATCGGGCAAACT1660.24699808055708483No Hit
GCTGCGTTCTTCATCGATGCTTTTCAGTGCGTGCCCTTCGCACATCTGCG1520.2261669171366078No Hit
GCTGCGTTCTTCATCGATGCAGACCTGTGTCTACCCTCGTGTGACACTGG1500.22319103664796822No Hit
GCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCATTGCTGAAAGTTT1450.2157513354263693No Hit
GCTGCGTTCTTCATCGATGCAACCAACCGTTCGGCTGCGTTCTTCATCGA1420.21128751469340992No Hit
GCTGCGTTCTTCATCGATGTCCCCCTCTGCCTGCTGCGTCTTCTCCACCT1420.21128751469340992No Hit
GCTGCGTTCTTCATCGATGCCACCACCTCAATGCCATCTCGCTGATCTGG1280.19045635127293287No Hit
GCTGCGTTCTTCATCGATGTGAGAGCCGAGATATCCGTTGCCGAGAGTCG1260.1874804707842933No Hit
GCTGCGTTCTTCATCGATGCCGGTGAATTATGCGATGGTGGTGGCGGCGG1130.16813724760813606No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGATATCCGTTGCCGAGAGTCG1060.15772166589789754No Hit
GCTGCGTTCTTCATCGATGCTGTTTAATTTTTCAAGAACGAGTTCGTAAT1050.15623372565357774No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCGTTGTTGAAAGTTT990.147306084187659No Hit
GCTGCGTTCTTCATCGATGCAACCAACCGTTCTGCTGCGTTCTTCATCGA970.14433020369901944No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCATTGTCGAGAGTCG960.14284226345469966No Hit
GCTGCGTTCTTCATCGAAACGGATATAACTACCATCTTTTCTTCTGGTCT950.14135432321037988No Hit
GCTGCGTTCTTCATCGATGCTCATTATCTTTTTTTTTTGGTAATAGTTAT940.1398663829660601No Hit
GCTGCGTTCTTCATCGAGGTCGATGAAGGAGTCATAGCGCTCGGAGCGCA920.13689050247742052No Hit
GCTGCGTTCTTCATCGATGCGAGAGCAGAGATATCCGTTGCCGAGAGTCG910.13540256223310074No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCCATTGCCGAGAGTCG860.12796286101150178No Hit
GCTGCGTTCTTCATCGATGCACCAACCGTTCGGCTGCGTTCTTCATCGAT840.12498698052286221No Hit
GCTGCGTTCTTCATCGATGCTTCTTGAATAGTAACCTTTTCTAAGCACTA830.12349904027854242No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCAAGAGTCG830.12349904027854242No Hit
GCTGCGTTCTTCATCGATGCAACCAACCGTTCGGCTGCGTTCTTCATCGG820.12201110003422264No Hit
GCTGCGTTCTTCATCGATGCAACCAACCGTTCAGCTGCGTTCTTCATCGA800.11903521954558305No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCCGTTGCCGAGAGTCA790.11754727930126327No Hit
GCTGCGTTCTTCATCGATGCCTGCGGATGCAATTGCCTCGACACTCGGGT770.1145713988126237No Hit
TCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG760.1130834585683039No Hit
GCTGCGTTCTTCATCGATGCTGCTGCTATTGCCGTGAACGCTTCGACGCG720.10713169759102474No Hit
GCTGCGTTCTTCATCGATGCGTTCAATATTGCTATTTACTTCGCAAATCA710.10564375734670496No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)