FastQCFastQC Report
Sun 21 May 2023
EGAF00007833438

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007833438
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences104452
Sequences flagged as poor quality0
Sequence length236-238
%GC52

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGAGTGACTGTTGGGCCCCACTGCTGCGACTCT4367241.81059242522881No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATCAAAATAA3037029.075556236357368No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG54575.224409298050779No Hit
GCTGCGTTCTTCATCGATGCGTTCAATATTGCTATTTACTTCGCAAATCA38933.7270708076437025No Hit
GCTGCGTTCTTCATCGATGCGTGACTGTTGGGCCCCACTGCTGCGACTCT11601.1105579596369624No Hit
GCTGCGTTCTTCATCGATGCACGAGCCGAGTGATCCACCGCTAAGAGTCG9940.9516332861027075No Hit
GCTGCGTTCTTCATCGATGCGATAAAGGTTGGCATCGTGTTTAATGGGTG9510.910466051392027No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCGTTGTTGAAAGTTT9060.8673840615785241No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT8400.8041971431853865No Hit
GCTGCGTTCTTCATCGATGCAGGTGAAGAGGTCTATGGCGGACAGGTCGT6940.6644200206793551No Hit
GCTGCGTTCTTCATCGATGTCCCCCTCTGCCTGCTGCGTCTTCTCCACCT5420.5188986328648565No Hit
GCTGCGTTCTTCATCGATGCCTCCCCAGTATCTCCTGCTCTCTTTTGCAT5310.5083674797993337No Hit
GCTGCGTTCTTCATCGATGCGTTGTTATTCTACTTCGCAAATCAAAATAA5290.5064527246965114No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTAAAAGTTT4820.4614559797801861No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCATTGTTGAAAGTTT4310.4126297246582162No Hit
TCTGCGTTCTTCATCGATGAGTGACTGTTGGGCCCCACTGCTGCGACTCT3530.3379542756481446No Hit
GCTGCGTTCTTCATCGATGCTGCACAGAGCCTGCATCCTCCTCCTCCTCG3180.30444606134875346No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT2970.2843411327691188No Hit
GCTGCGTTCTTCATCGATGCTGTAAGATTCAAACTCATCCGTTATATCGG2770.2651935817408953No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG2340.22402634703021485No Hit
GCTGCGTTCTTCATCGATGCCAGGATAAGCCCAGCTGGAGAGGCTGGGAG2210.21158043886186956No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTGAAAGTTG2140.20487879600199135No Hit
TCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATCAAAATAA1940.18573124497376786No Hit
GCTGCGTTCTTCATCGTTTCGAAACGCCTAGGCATCCGCCGTATGCCCTT1840.17615746945965613No Hit
GCTGCGTTCTTCATCGATGCATTCAATATTGCTATTTACTTTGCAAATTA1710.16371156129131084No Hit
GCTGCGTTCTTCATCGCTGTCAGATGCCTTGGCATCCTTCGTATGCCCTT1670.15988205108566614No Hit
GCTGCGTTCTTCATCGATGTCGGAACCAAGAGATCCGTTGTTGAAAGTTT1600.15318040822578793No Hit
GATGCGTTCTTCATCGATGAGTGACTGTTGGGCCCCACTGCTGCGACTCT1500.14360663271167617No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTG1440.13786236740320912No Hit
GCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGAAAGTTT1440.13786236740320912No Hit
GCTGCGTTCTTCATCGATGCCGTTGTCGACCGCTTCGCGGATCAGGTGGT1340.1282885918890974No Hit
GCTGCGTTCTTCATCGATGCCACTGCCCCCGTTCCAACGCCACTGCCCCT1230.11775743882357445No Hit
GCTGCGTTCTTCATCGACTCTTGGTGCCAAGGCATCCGCCTTACGCCCTT1190.11392792861792977No Hit
GCTGCGTTCTTCATCGATGCGAAAGCCGAGATATCCGTTGCCGAGAGTCG1120.10722628575805156No Hit
GCTGCGTTCTTCATCGATGCATATGTGGTGTGGCCCACATTTCTGTATGC1110.10626890820664037No Hit
GCTGCGTTCTTCATCGATTAGTGACTGTTGGGCCCCACTGCTGCGACTCT1100.10531153065522919No Hit
GCTGCGTTCTTCATCGATGCACTGATCTCGCGGATGAGCGAGCAGCCCAT1050.10052464289817331No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)