FastQCFastQC Report
Sun 21 May 2023
EGAF00007833446

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007833446
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences97331
Sequences flagged as poor quality0
Sequence length235-238
%GC56

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGGGCAAACT2098321.558393523132406No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG2015620.708715619894996No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATCAAAATAA87428.981722164572439No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT70027.194008075536057No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG69847.175514481511542No Hit
GCTGCGTTCTTCATCGATGCGGAGCTTGACGTCGCGTGGGCAGATCATCC55185.66931399040388No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCGTTGTTGAAAGTTT21792.2387522988564794No Hit
GCTGCGTTCTTCATCGATGAGTGACTGTTGGGCCCCACTGCTGCGACTCT15481.5904490861082285No Hit
GCTGCGTTCTTCATCGATGCCGTTTCCGAGGCCGGACGATCGGGCAAACT14571.4969536940954062No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCATTGTTGAAAGTTT13001.3356484573260319No Hit
GCTGCGTTCTTCATCGATGCACGATCCTTCCTCGCTGCAGGATCCTTCCT11731.205165877264181No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT11111.1414657200686318No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCCGTTGCCGAGAGTCA9841.010983140006781No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAAGCCGGACGATCGGGCAAACT9360.9616668892747429No Hit
GCTGCGTTCTTCATCGATGCTGTTTAATTTTTCAAGAACGAGTTCGTAAT6170.6339193062847397No Hit
GCTGCGTTCTTCATCGATGCCATGAATCCCTGCAGATATCCAACCAGCTC5460.5609723520769333No Hit
GCTGCGTTCTTCATCGATGCCATCTGGCCATGGTTGAGGAGGGTGGGAGC5280.5424787580524191No Hit
GCTGCGTTCTTCATCGATGCCCCTTCCTTCCCATGCCTTAGCTTCCTCCT5050.5188480545766508No Hit
GCTGCGTTCTTCATCGAGGAAGCAATGTGGAGAATATCGGATTCGAACCG4680.48083344463737143No Hit
GCTGCGTTCTTCATCGATGCACACAGGAGCTCAGAATATACCTAGTGAAG4550.4674769600641111No Hit
GCTGCGTTCTTCATCGATGCGCACACTACTCCCACCGCCCCCGAGTGCCT3990.4099413342100667No Hit
GCTGCGTTCTTCATCGACTCTTACTACCTAGGCATCCTTTGTGTGCCCTT3990.4099413342100667No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTG3580.36781703670978416No Hit
GCTGCGTTCTTCATCGATGCGTTTTTGTTCTCTGTTTTTTTCTTTACGCT3150.323637895429No Hit
GCTGCGTTCTTCATCGATGCCAAATATACCGCCGTATCTATACTCCCCCC3040.3123362546362413No Hit
GCTGCGTTCTTCATCGATGCTACCCTTATCTGCAGCAGCTGGAATCTCTG2780.28562328548972066No Hit
GCTGCGTTCTTCATCGATGCACGAGCCGAGTGATCCACCGCTAAGAGTCG2380.2445264098796889No Hit
GCTGCGTTCTTCATCGATGCTCATCAGGGATATTGGCCTAAAATTTTCTT2190.22500539396492383No Hit
GCTGCGTTCTTCATCGATGCGTTTTAGTTCTCTGCTTTTTTCTTTACGCT2190.22500539396492383No Hit
GCTGCGTTCTTCATCGATGCCTTTCGCCGACAAACAACTAACGTAGATAT2090.21473117506241585No Hit
GCTGCGTTCTTCATCGACGACAGTCTCGACTATCTCGAGCGAATCGACGA2000.2054843780501587No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTAAAAGTTT1920.19726500292815236No Hit
GCTGCGTTCTTCATCGATGCTAGAGCCGAGATATCCGTTGCCGAGAGTCG1910.19623758103790157No Hit
GCTGCGTTCTTCATCGATGCACGATCATTCCTGGTTGCACGATCCTTCCT1810.18596336213539366No Hit
GCTGCGTTCTTCATCGATGCTAGTTGGCGGGTGAATACTGTAATGTCTTC1750.1797988307938889No Hit
GCTGCGTTCTTCATCGATGCTAGGTTTTTTACTTCTTCTTTTGCTTCAGC1670.17157945567188254No Hit
GCTGCGTTCTTCATCGATGCCTCATCATAGTCGCCATAACCATGAAGGCT1620.1664423462206286No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTGAAAGTTG1600.16438750244012698No Hit
GCTGCGTTCTTCATCGATGCAGGATCCTTCCTCGCTGCACGATCATTCCT1580.1623326586596254No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCA1520.15616812731812066No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTCCACTTCGCAAATCAAAATAA1330.13664711140335556No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTTCCGAGAGTCG1220.12534547061059684No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCCGTTGCCGAGAGTCG1180.12123578304959366No Hit
GCTGCGTTCTTCATCGATGCATGATGATTCCTTGCTGCACGATCCTTCCT1150.11815351737884128No Hit
GCTGCGTTCTTCATCGATGCTGGCTCCAGGGAGCTTCTTGATGAGGTCAG1150.11815351737884128No Hit
GCTGCGTTCTTCATCGATGCCACCACCTCAATGCCATCTCGCTGATCTGG1110.1140438298178381No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGATGCCGGACGATCGGGCAAACT1070.10993414225683493No Hit
GCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGAAAGTTT1050.10787929847633335No Hit
GCTGCGTTCTTCATCGATGCATATGTGGTGTGGCCCACATTTCTGTATGC1040.10685187658608253No Hit
GCTGCGTTCTTCATCGAAACGGATATAACTACCATCTTTTCTTCTGGTCT1020.10479703280558096No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)