FastQCFastQC Report
Sun 21 May 2023
EGAF00007833452

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007833452
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences572373
Sequences flagged as poor quality0
Sequence length235-238
%GC54

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGAGTGACTGTTGGGCCCCACTGCTGCGACTCT29810552.08229598531028No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCGTTGTTGAAAGTTT289275.053872212700459No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATCAAAATAA241424.217878900646956No Hit
GCTGCGTTCTTCATCGATGCCATCTGGCCATGGTTGAGGAGGGTGGGAGC217303.796475375323434No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG173543.0319389628791016No Hit
GCTGCGTTCTTCATCGATGCAAACCTCGGCCGCACCCCAAGGCCTTGCTG156922.741568872046725No Hit
GCTGCGTTCTTCATCGATGCACGAGCCGAGTGATCCACCGCTAAGAGTCG140802.459934343513758No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT109961.9211248608861704No Hit
GCTGCGTTCTTCATCGATGCGCTGGGCTATCCCTTCTGCCGTGGCCGTCT94821.6566120344600463No Hit
GCTGCGTTCTTCATCGATGCGTGACTGTTGGGCCCCACTGCTGCGACTCT82611.4432896031084625No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG75631.3213411534087038No Hit
GCTGCGTTCTTCATCGATGCCGTTTCCGAGGCCGGACGATCGGGCAAACT58601.023807901490811No Hit
GCTGCGTTCTTCATCGATGCCTCCCCAGTATCTCCTGCTCTCTTTTGCAT48070.8398369594652437No Hit
GCTGCGTTCTTCATCGATGCTCATTATCTTTTTTTTTTGGTAATAGTTAT43710.7636628562143917No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATTAAAATAA42440.7414745279738911No Hit
GCTGCGTTCTTCATCGATGCTGCACAGAGCCTGCATCCTCCTCCTCCTCG35100.6132364734185575No Hit
GCTGCGTTCTTCATCGATGCATATGTGGTGTGGCCCACATTTCTGTATGC31070.5428278412853157No Hit
GCTGCGTTCTTCATCGATGCCATCCTGCAGAAAGCACTGTGCACGCTGCA27500.48045592646753077No Hit
GCTGCGTTCTTCATCGATGCCAAAGGGTTCAGGATTTCCTCCGCCCTCCC25710.44918261343564425No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT21430.37440620015269765No Hit
GCTGCGTTCTTCATCGATGCGTTCAATATTGCTATTTACTTCGCAAATCA19390.33876510597110626No Hit
TCTGCGTTCTTCATCGATGAGTGACTGTTGGGCCCCACTGCTGCGACTCT18720.3270594524898973No Hit
GCTGCGTTCTTCATCGATGCTCATCAGGGATATTGGCCTAAAATTTTCTT18540.32391465006210984No Hit
GCTGCGTTCTTCATCGATGCCGGTCCCCGGCAGGCCCCCAAGATTGCCCA17950.31360668654880647No Hit
GCTGCGTTCTTCATCGATGCCACCACCTCAATGCCATCTCGCTGATCTGG16260.2840804859768018No Hit
GCTGCGTTCTTCATCGATGTCCCCCTCTGCCTGCTGCGTCTTCTCCACCT15950.27866443735116786No Hit
GCTGCGTTCTTCATCGATGGGAGAACCAAGAGATCCGTTGTCGAAAGTTG15040.2627657139662423No Hit
GCTGCGTTCTTCATCGATGCCTGTCCACATCTAAGGTTAGATGACGACCC14230.24861410304119866No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGCTGCCGAGAGTCG13800.24110151946370637No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTAAAAGTTT12290.21472012131948923No Hit
GCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGAAAGTTT12160.2124488751216427No Hit
GCTGCGTTCTTCATCGATGCTTCTTGAATAGTAACCTTTTCTAAGCACTA11710.20458686905217402No Hit
GCTGCGTTCTTCATCGATGCGAATAACTACGACGAAGAGGGCAAGGTTAC11040.1928812155709651No Hit
GCTGCGTTCTTCATCGATGCCTGGGTGAGCAGGTGGAATTACCTGTCTAG8810.15392060771559804No Hit
GCTGCGTTCTTCATCGATGCCCCTTCCTTCCCATGCCTTAGCTTCCTCCT7620.1331299694430031No Hit
GCTGCGTTCTTCATCGATGCAAATATGGTTCATCCACCGGCAATGAGACA7550.13190699072108572No Hit
GCTGCGTTCTTCATCGATTAGTGACTGTTGGGCCCCACTGCTGCGACTCT7150.124918540881558No Hit
GCTGCGTTCTTCATCGATGCTGATGTGACGTGTGCATGTGTGGGGTGTGT6960.12159902720778233No Hit
GCTGCGTTCTTCATCGATGCCTTGTAAGAATTCAGTTAGTTGACTTTTTG6890.12037604848586499No Hit
GCTGCGTTCTTCATCGATGCGGCCTTCGTAGGGGAAGATGTCGAGCACGT6840.11950249225592402No Hit
GCTGCGTTCTTCATCGATGCCAAGGAGCGGATTAAACCCTTCAGTAAGAC6700.11705653481208932No Hit
GCTGCGTTCTTCATCGATGCCTATCACACCATTTAAGATGTTTTCCTGTG6400.11181519743244353No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTCCACTTCGCAAATCAAAATAA6100.10657386005279774No Hit
GCTGCGTTCTTCATCGATGCATTCAATATTGCTATTTACTTTGCAAATTA6050.10570030382285678No Hit
GCTGCGTTCTTCATCGATGCACACATGGGGGCCACGTCAGGTGACCACTC6010.10500145883890401No Hit
GCTGCGTTCTTCATCGATGCAATGGTAGCCTTCAAGTATGATGCCTGACA5880.10273021264105749No Hit
GCTGCGTTCTTCATCGATGCACACAGGAGCTCAGAATATACCTAGTGAAG5820.10168194516512834No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)