FastQCFastQC Report
Sun 21 May 2023
EGAF00007833461

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007833461
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences157480
Sequences flagged as poor quality0
Sequence length247-250
%GC52

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGAAGTAAAAGTCGTAACAAGGAAAACAGTGAACAGCCTCAGTTCCCTGG10525666.83769367538736No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATC103146.549403098806198No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCTGTAGGTGAACCTGCAGAAGGATC63934.0595631191262385No Hit
GGAAGTAAAAGTCGTAACAAGGATAGGTGAAATCTCAGAGAAAGCGTAGA51703.282956565913132No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTAGGGGAACCTGCGGCTGGATC49863.166116332232664No Hit
GGAAGTAAAAGTCGTAACAAGGGCGGCGAAGACGTCGAGAAGGAAGCGGC40672.58255016510033No Hit
GGAAGTAAAAGTCGTAACAAGGACATTCAAAAGGGGAGCGCGCGGAAGTG20801.3208026416052832No Hit
GGAAGTAAAAGTCGTAACAAGGAACGAAGATGAAGGACACCTCTCCGGCA20461.2992125984251968No Hit
GGAAGTAAAAGTCGTAACAAGGTCTCCGTAGGTGAACCTGCGGAGGGATC9580.6083312166624333No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTATCGGAAGGTGCGGCTGGATC9480.601981203962408No Hit
GGAAGTAAAAGTCGTAACAAGGGAGATGGGGATGCAGGGTGCTCCTGTGG9390.5962661925323851No Hit
GGAAGTAAAAGTCGTAACAAGGTCTCCGTTGGTGAACCAGCGGAGGGATC5430.34480568961137925No Hit
GGAAGTAAAAGTCGTAACAAGGAAAGAAGCTGGCATCTCAACAATGACGG4120.2616205232410465No Hit
GGAAGTAAAAGTCGTAACAAGGCTGAGTTGCACAAACTCTTTTTTGATTT3580.22733045466090934No Hit
GGAAGTAAAAGTCGTAACAAGGCATCGGCATGAAACTCACCGAAAGCTAC3420.2171704343408687No Hit
GGAAGTAAAAGTCGTAACAACACTAAATCTTATCTCCAGCCCTCAGAAGG3170.20129540259080517No Hit
GGAAGTAAAAGTCGTAACAAGGCAAAAATAGACAAGTGGGACTATATCAA2870.18224536449072898No Hit
GGAAGTAAAAGTCGTAACAAGGTGACGGCAGAAAGGCCAGACGGCCCCGG2820.17907035814071628No Hit
GGAAGTAAAAGTCGTAACAAGGTATCAGTAGGTGAACCTGCTGATGGATC2440.15494030988061977No Hit
GGAAGTAAAAGTCGTAACAAGGAAAACAGTGAACAGCCTCAGTTCCCTGA2270.14414528829057657No Hit
GGAAGTAAAAGTCGTAACAAGGGGCTGGGTCAGCGGGGTGCCCGACGGTG2020.12827025654051308No Hit
GGAAGTAAAAGTCGTAACAAGGAGGACTGGGTTGCACTCGGTGCATTTTA1940.12319024638049277No Hit
GGAAGTAAAAGTCGTAACAAGGTGAAGGAAGCGAGGATGAATGGGAACAA1730.10985521971043942No Hit
GGAAGTAAAAGTCGTAACAAGGGCCAGCCAGGGAGAGGTCTCCCCAGGCC1730.10985521971043942No Hit
GGAAGTAAAAGTCGTAACAAGGTGTACATAAAAGGCGACGGCGGAAAATG1610.10223520447040894No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)