FastQCFastQC Report
Sun 21 May 2023
EGAF00007833466

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007833466
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences169726
Sequences flagged as poor quality0
Sequence length235-238
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGGGAGAACCAAGAGATCCGTTGTCGAAAGTTG12902976.02194124647961No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGGGCAAACT94695.578992022436162No Hit
GCTGCGTTCTTCATCGATGCCGATTTGTTTCTCAAAATCACCCTGACCAT86795.113535934388367No Hit
GCTGCGTTCTTCATCGATGCCTCTGCTATCCTGGCTGCGTTCTTCATCGA13680.8060049727207381No Hit
GCTGCGTTCTTCATCGATAAAGTCGAGAGAAATTTGCGCCTGTCCGAGGT13630.8030590481128407No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTAAAAGTTT12920.7612269186806971No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG12550.7394270765822561No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATCAAAATAA9780.5762228533047382No Hit
GCTGCGTTCTTCATCGATGCCTCTGCTATCCTCGCTGCGTTCTTCATCGA9290.5473527921473433No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT7780.4583858689888408No Hit
TCTGCGTTCTTCATCGATGGGAGAACCAAGAGATCCGTTGTCGAAAGTTG7510.4424778761061947No Hit
GCTGCGTTCTTCATCGATGCCTCTGCTATCCTTGCTGCGTTCTTCATCGA6610.3894512331640409No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG5700.33583540530030753No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT5250.30932208382923065No Hit
GCTGCGTTCTTCATCGATGCCTCTGCTATCCTAGCTGCGTTCTTCATCGA4730.27868446790709733No Hit
GCTGCGTTCTTCATCGATGGGAGAACCTAGAGATCCGTTGTCGAAAGTTG4310.25393870120075884No Hit
GCTGCGTTCTTCATCGATGCCGTTTCCGAGGCCGGACGATCGGGCAAACT3920.2309604892591589No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAAGCCGGACGATCGGGCAAACT3890.2291929344944204No Hit
GCTGCGTTCTTCATCGATGCGTTTTTGTTCTCTGTTTTTTTCTTTACGCT3760.22153353051388708No Hit
GCTGCGTTCTTCATCGATGCTCTGCTATCCTGGCTGCGTTCTTCATCGAT3190.1879499899838563No Hit
GCTGCGTTCTTCATCGATGCTCTGCTATCCTCGCTGCGTTCTTCATCGAT3140.1850040653759589No Hit
GCTGCGTTCTTCATCGATTGGAGAACCAAGAGATCCGTTGTCGAAAGTTG3070.18087977092490248No Hit
GCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCATTGTTGAAAGTTG2420.14258275102223583No Hit
GCTGCGTTCTTCATCGATGCTCTGCTATCCTTGCTGCGTTCTTCATCGAT2130.12549638829643073No Hit
GCTGCGTTCTTCATCGATGGGAGAACAAAGAGATCCGTTGTCGAAAGTTG2070.1219612787669538No Hit
GCTGCGTTCTTCATCGACTCTTACTACCTAGGCATCCTTTGTGTGCCCTT1870.11017758033536405No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)