FastQCFastQC Report
Sun 21 May 2023
EGAF00007833476

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007833476
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences167055
Sequences flagged as poor quality0
Sequence length237-238
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGGGCAAACT7899647.287420310676126No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG2364614.154619736015084No Hit
GCTGCGTTCTTCATCGATGCCGTTTCCGAGGCCGGACGATCGGGCAAACT1782110.66774415611625No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT82234.922330968842597No Hit
GCTGCGTTCTTCATCGATGCAAGTGCACGTAAGCTGCGTTCTTCATCGAT52893.166023166023166No Hit
GCTGCGTTCTTCATCGATGAAGTGCACGTAAGCTGCGTTCTTCATCGATG42052.5171350752746102No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG35002.0951183741881416No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTAAAAGTTT26711.5988746221304362No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT23391.4001376792074467No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAAGCCGGACGATCGGGCAAACT17001.017628924605669No Hit
GCTGCGTTCTTCATCGATGCCAGGCAAACAAAGGAACAACACATGCGTGT10810.6470922749992517No Hit
GCTGCGTTCTTCATCGATGAAGTGCACGTAAGCTGCGTTCTTCATCGGCT6730.4028613330938912No Hit
GCTGCGTTCTTCATCGATGCAAGTGCACGTAAGCTGCGTTCTTCATCGGC6570.3932836490976026No Hit
GCTGCGTTCTTCATCGATGCAGTGCACGTAAGCTGCGTTCTTCATCGATG5510.3298314926221903No Hit
GCTGCGTTCTTCATCGATGCCAGGCAAACAAAGGAACAACACAATGTGTT5470.32743707162311814No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAGGTTT4730.2831402831402831No Hit
GCTGCGTTCTTCATCGATGCTCATCAGGGATATTGGCCTAAAATTTTCTT4170.24961838915327286No Hit
GCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGAAAGTTT4090.24482954715512856No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCTAGGCCGGACGATCGGGCAAACT3330.19933554817275745No Hit
GCTGCGTTCTTCATCGATGCACGAGCCGAGTGATCCACCGCTAAGAGTCG2980.17838436443087607No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGATGCCGGACGATCGGGCAAACT2950.17658854868157192No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGATATCCGTTGTTAAGAGTCG2630.15743318068899465No Hit
GCTGCGTTCTTCATCGATGCACACAGGAGCTCAGAATATACCTAGTGAAG2580.15444015444015444No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGTGCAAACT2400.14366525994432972No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACTATCGGGCAAACT2280.13648199694711322No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGGTCAAACT2240.13408757594804108No Hit
GCTGCGTTCTTCATCGATGCCCCTTCCTTCCCATGCCTTAGCTTCCTCCT2070.12391128670198438No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCATTGTTGAAAGTTT2000.11972104995360809No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTG1980.11852383945407201No Hit
GCTGCGTTCTTCATCGATGAAGTGCACGTAAGCTGCGTTCTTCATCGCCC1910.11433360270569573No Hit
GCTGCGTTCTTCATCGATGTCGCTTCCGAGGCCGGACGATCGGGCAAACT1850.11074197120708748No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGGACAAACT1820.10894615545778337No Hit
GCTGCGTTCTTCATCGATGCCAGGCAAACAAAGGAACAACACACACGTGT1780.1065517344587112No Hit
GCTGCGTTCTTCATCGATGCGGAGCTTGACGTCGCGTGGGCAGATCATCC1750.10475591870940709No Hit
GCTGCGTTCTTCATCGATGCAAGTGCACGTAAGCTGCGTTCTTCATCGCC1720.10296010296010295No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)