FastQCFastQC Report
Sun 21 May 2023
EGAF00007833482

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007833482
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences73063
Sequences flagged as poor quality0
Sequence length235-238
%GC60

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG3484847.69582415175944No Hit
GCTGCGTTCTTCATCGATGCCGATTTGTTTCTCAAAATCACCCTGACCAT35824.902618288326513No Hit
GCTGCGTTCTTCATCGATGCCAGGCAAACAAAGGAACAACACATGCGTGT35024.7931237425235755No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT31794.351039513844217No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG29854.085515240272094No Hit
GCTGCGTTCTTCATCGATGCTCCATGTTATATGGATTTCATAACTAATAC29063.9773893762916934No Hit
GCTGCGTTCTTCATCGATGCCGTTTCCGAGGCCGGACGATCGGGCAAACT28053.839152512215485No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT12831.7560187783146053No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCATTGTTGAAAGTTT12011.6437868688665944No Hit
GCTGCGTTCTTCATCGACGACAGTCTCGACTATCTCGAGCGAATCGACGA9601.3139345496352464No Hit
GCTGCGTTCTTCATCGATGAGTGACTGTTGGGCCCCACTGCTGCGACTCT8691.1893845037844053No Hit
GCTGCGTTCTTCATCGATGCTCATCAGGGATATTGGCCTAAAATTTTCTT6690.9156481392770622No Hit
GCTGCGTTCTTCATCGATGCGTAGACAGACGAAGCACAGCCAAGTAGCAG6020.8239464571671024No Hit
GCTGCGTTCTTCATCGATGCCTTTGCCGAAGACGAACCGTGGCGGGCCGT6000.821209093522029No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTAAAAGTTT5490.7514063205726564No Hit
GCTGCGTTCTTCATCGATGCAGTAAGACCGTAGCTGCGTTCTTCATCGAT5160.706239820428945No Hit
GCTGCGTTCTTCATCGATGCACGAGCCGAGTGATCCACCGCTAAGAGTCG4580.6268562747218154No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATCAAAATAA4510.6172755019640584No Hit
GCTGCGTTCTTCATCGATGCTGTTTAATTTTTCAAGAACGAGTTCGTAAT4240.5803210927555671No Hit
GCTGCGTTCTTCATCGATGGGAGAACCAAGAGATCCGTTGTCGAAAGTTG4230.5789524109330304No Hit
GCTGCGTTCTTCATCGACTCTTACTACCTAGGCATCCTTTGTGTGCCCTT4080.5584221835949796No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCGTTGTTGAAAGTTT3050.41744795587369804No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTAG2800.38323091031028017No Hit
GCTGCGTTCTTCATCGATGCGGACATCTCCGTACTTCTCACGTGCCTGGT2330.31890286465105455No Hit
GCTGCGTTCTTCATCGATGCAGTAAGACCGTAGCTGCGTTCTTCATCGGC2180.29837263731300384No Hit
GCTGCGTTCTTCATCGATGCGATCGACAACGCCAACCGCCGCAAAGTTCG1830.2504687735242188No Hit
GCTGCGTTCTTCATCGATGCACCTGAGCCAATTTTTGGCTTGGCGGTAAC1720.23541327347631497No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCCATTGCCGAGAGTCG1710.23404459165377822No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTCCACTTCGCAAATCAAAATAA1680.2299385461861681No Hit
GCTGCGTTCTTCATCGATGCGGATACGCTGAGCACCGTGACGCCGGACAA1610.2203577734284111No Hit
GCTGCGTTCTTCATCGATGCCGATGCGCAGGGCAATGCGTCGAGCGCATT1610.2203577734284111No Hit
GCTGCGTTCTTCATCGAAACGGATATAGCTACCATCTTTTCTTCTGGTCT1470.20119622791289707No Hit
GCTGCGTTCTTCATCGATGCGAGAGACGAGATATCCGTTGCCGAGAGTCG1400.19161545515514009No Hit
GCTGCGTTCTTCATCGATGCTAGAGCCGAGATATCCGTTGCCGAGAGTCG1390.19024677333260337No Hit
GCTGCGTTCTTCATCGCTGTCAGATGCCTTGGCATCCTTCGTATGCCCTT1320.18066600057484636No Hit
GCTGCGTTCTTCATCGATGCCAGGCAAACAAAGGAACAACACACATGTGT1300.17792863692977293No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGGGCAAACT1290.17655995510723624No Hit
GCTGCGTTCTTCATCGATGCCCTCTATCAGACGAATGGTAAAGGGGATAT1280.17519127328469952No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAAGCCGGACGATCGGGCAAACT1270.17382259146216278No Hit
GCTGCGTTCTTCATCGAAGAAAGGCACTGGTAGGCCTAAGTGGACTTGAA1260.17245390963962606No Hit
GCTGCGTTCTTCATCGATGCCGTTTCCGATGCCGGACGATCGGGCAAACT1180.16150445505933234No Hit
GCTGCGTTCTTCATCGATGCGTTCAATATTGCTATTTACTTCGCAAATCA1030.14097422772128163No Hit
GCTGCGTTCTTCATCGATGCCGCGCTGTACCATCCGCAACAATACGAACA1010.1382368640762082No Hit
GCTGCGTTCTTCATCGATGCCACCACCTCAATGCCATCTCGCTGATCTGG950.1300247731409879No Hit
GCTGCGTTCTTCATCGAAACGGATATAACTACCATCTTTTCTTCTGGTCT850.11633795491562077No Hit
GCTGCGTTCTTCATCGATGCCGAGTCGCTGCCTGAGGGTGGGCTCGTGCG850.11633795491562077No Hit
GCTGCGTTCTTCATCGATGCTACCCTTATCTGCAGCAGCTGGAATCTCTG840.11496927309308405No Hit
GCTGCGTTCTTCATCGATGCGGATTATCGGGGAGAAATCGGCGTAATCTT840.11496927309308405No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCATTGCCGAGAGTCG830.11360059127054734No Hit
GCTGCGTTCTTCATCGATGCCATTGGGACACTCGACCGCGGCACGCAGAC820.11223190944801062No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCTGAGAGTCG800.1094945458029372No Hit
GCTGCGTTCTTCATCGATGCTTCTTGAATAGTAACCTTTTCTAAGCACTA790.10812586398040047No Hit
GCTGCGTTCTTCATCGATTCGAGAGCCGAGATATCCGTTGCCGAGAGTCG790.10812586398040047No Hit
GCTGCGTTCTTCATCGATGCCAGTTGGCGCGTAAACACCGTGATGTCTTC780.10675718215786376No Hit
GCTGCGTTCTTCATCGATGACAGTCTCGACTATCTCTAGCGAATCGACGA770.10538850033532704No Hit
GCTGCGTTCTTCATCGATGCCCCTTCCTTCCCATGCCTTAGCTTCCTCCT760.10401981851279032No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCTAGAGTCG760.10401981851279032No Hit
GCTGCGTTCTTCATCGATGCAGACCTGTGTCTACCCTCGTGTGACACTGG760.10401981851279032No Hit
GCTGCGTTCTTCATCGATGCCGCCAGGCAGACCTACGAATACGCCGAAGT760.10401981851279032No Hit
GCTGCGTTCTTCATCGATGCTTCATCATAGTCGCCATAACCATGAAGGCT750.10265113669025362No Hit
GCTGCGTTCTTCATCGATGCGGTTGATGGTGGTGCCGCCGTAAATATGGC740.1012824548677169No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)