FastQCFastQC Report
Sun 21 May 2023
EGAF00007833496

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007833496
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences159223
Sequences flagged as poor quality0
Sequence length235-238
%GC51

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATCAAAATAA6203038.95793949366612No Hit
GCTGCGTTCTTCATCGATGAGTGACTGTTGGGCCCCACTGCTGCGACTCT2301214.452685855686678No Hit
GCTGCGTTCTTCATCGATGGGAGAACCAAGAGATCCGTTGTCGAAAGTTG111326.991452239940211No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG90475.681968057378645No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT80615.062710789270394No Hit
GCTGCGTTCTTCATCGATGCTGATTTCGCCGTTGTGAATACTGCCGCTAA63403.9818367949354054No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATTAAAATAA30771.9325097504757478No Hit
GCTGCGTTCTTCATCGATGCACGAGCCGAGTGATCCACCGCTAAGAGTCG19931.2517035855372654No Hit
GCTGCGTTCTTCATCGATGCGTTCAATATTGCTATTTACTTCGCAAATCA18571.1662887899361274No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTG17611.1059959930412062No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTGAAAGTTG12350.7756417100544519No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTCCACTTCGCAAATCAAAATAA11470.7203733129007744No Hit
GCTGCGTTCTTCATCGATGCTTCTTGAATAGTAACCTTTTCTAAGCACTA11070.6952513141945573No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGATATCCATTGTTAACAGTTG9510.5972755192403107No Hit
GCTGCGTTCTTCATCGATGGGAGAACCAAGAGATCCGTTGTTGAAAGTTG8270.5193973232510378No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT7140.4484276769059746No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTAAAAGTTT5930.372433630819668No Hit
GCTGCGTTCTTCATCGATGCCGTTTCCGAGGCCGGACGATCGGGCAAACT5110.32093353347192305No Hit
GCTGCGTTCTTCATCGATGCACATGACTAAGCCTTGCTGTGGGAAAGGAT4740.29769568466867224No Hit
GCTGCGTTCTTCATCGATGCTTATAAATGTATGTTCTGTGTCTGGTCACA4640.291415184992118No Hit
GCTGCGTTCTTCATCGATGCTGACATTGTGTATGTTTCTGAATATTTTCT4550.2857627352832191No Hit
GCTGCGTTCTTCATCGATGCCCTTGTGGCCACCCCCTGACATGACTCCTT4530.28450663534790827No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTG4520.28387858538025285No Hit
GCTGCGTTCTTCATCGATGCGTGACTGTTGGGCCCCACTGCTGCGACTCT4200.2637809864152792No Hit
GCTGCGTTCTTCATCGATGCTCATTATCTTTTTTTTTTTTGGTAATAGTT3990.2505919370945152No Hit
TCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATCAAAATAA3850.24179923754733929No Hit
GCTGCGTTCTTCATCGATGCACACAGGAGCTCAGAATATACCTAGTGAAG3500.21981748867939935No Hit
GCTGCGTTCTTCATCGATGCGAGATCCGAGATATCCGTTGCCGAGAGTCG3230.20286013955270282No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG3070.19281134007021597No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCGTTGTTGAAAGTTT3010.18904304026428342No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCATTGTTGAAAGTTT2930.18401864052304No Hit
GCTGCGTTCTTCATCGATGCCAGAGAACTCAATGACTGAACCTGGGTGGA2830.17773814084648573No Hit
GCTGCGTTCTTCATCGATGTCCCCACAAAGGACATGAACTCATCCTTTTT2810.1764820409111749No Hit
GCTGCGTTCTTCATCGATGCGCCGGACTTTAATCTCGGCGTGGCGGAAAA2770.17396984104055319No Hit
GCTGCGTTCTTCATCGATGCCTCCCCAGTATCTCCTGCTCTCTTTTGCAT2710.17020154123462064No Hit
GCTGCGTTCTTCATCGATGCTCATCAGGGATATTGGCCTAAAATTTTCTT2690.16894544129930977No Hit
GCTGCGTTCTTCATCGATGCGAGAGCTGAGATATCCGTTGCCGAGAGTCG2690.16894544129930977No Hit
GCTGCGTTCTTCATCGATGCGCAGCCAGCCATTCAGACCGATCTGGAAGA2210.1387990428518493No Hit
GCTGCGTTCTTCATCGATGCCTGTCCACATCTAAGGTTAGATGACGACCC2190.13754294291653846No Hit
GCTGCGTTCTTCATCGATGCGTTGATATTTCACTTCGCAAATCAAAATAA2160.13565879301357214No Hit
GCTGCGTTCTTCATCGATGCCGCCACGTTCGGCAAGGCTCATTTCGCTGG2000.12560999353108535No Hit
GCTGCGTTCTTCATCGATGCCGCCGCGGTGAATGAGGTTTCCGTCTTCTA1920.1205855937898419No Hit
GCTGCGTTCTTCATCGATTACTTACAGCTACCCAAGGCATATCGTCGTTT1820.11430509411328765No Hit
GCTGCGTTCTTCATCGATGCTCTCGGCAAAGGCGCTCGCCTCGGCCCGCA1730.10865264440438882No Hit
GCTGCGTTCTTCATCGATGCTGGCATGGCCGCTCATCATCACCACAGGCA1680.10551239456611167No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)