FastQCFastQC Report
Sun 21 May 2023
EGAF00007833502

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007833502
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences99894
Sequences flagged as poor quality0
Sequence length235-238
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGAGTGACTGTTGGGCCCCACTGCTGCGACTCT3227532.30924780267083No Hit
GCTGCGTTCTTCATCGATGCGTACATAAACTATGTAGGAACGCCCGCGCT2465724.683164154003244No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATCAAAATAA75557.563016797805674No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAAGCCGGACGATCGGGCAAACT53855.3907141570064265No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT50465.051354435701843No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG34363.4396460247862732No Hit
GCTGCGTTCTTCATCGATTTCACCCAACAATGCTTCAGGAGAAACGACAA12441.245320039241596No Hit
GCTGCGTTCTTCATCGATGCGTGACTGTTGGGCCCCACTGCTGCGACTCT9160.9169719903097282No Hit
GCTGCGTTCTTCATCGATGCCGCAATGGTAGGGCATTTAGGCTCAGCAGC7910.7918393497106933No Hit
GCTGCGTTCTTCATCGATGCGTTGATATTCCACTTCGCAAATCAAAATAA6890.6897311149818808No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG6860.686727931607504No Hit
GCTGCGTTCTTCATCGATGCACGAGCCGAGTGATCCACCGCTAAGAGTCG6430.6436823032414359No Hit
GCTGCGTTCTTCATCGATGCCATCTGGCCATGGTTGAGGAGGGTGGGAGC6160.6166536528720443No Hit
GCTGCGTTCTTCATCGATGCCTCCCCAGTATCTCCTGCTCTCTTTTGCAT5530.5535868020101307No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT4350.43546158928464174No Hit
GCTGCGTTCTTCATCGATGCTCATTATCTTTTTTTTTTGGTAATAGTTAT4190.4194446112879653No Hit
GCTGCGTTCTTCATCGATGCGTTCAATATTGCTATTTACTTCGCAAATCA4010.4014255110417042No Hit
GCTGCGTTCTTCATCGATGCATTCAATATTGCTATTTACTTTGCAAATTA3280.32834804893186775No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCATTGTTGAAAGTTT2750.27529180931787695No Hit
GCTGCGTTCTTCATCGATGCAGAACGCAGTGTGCGGATGGAGGCGCGCTA2640.2642801369451619No Hit
GCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCATTGTTGAAAGTTG2610.26127695357078506No Hit
GCTGCGTTCTTCATCGATGCCGCCCGGGCCGAAAGCGTCCTGCAACAACT2470.24726209782369313No Hit
GCTGCGTTCTTCATCGATGCACGAACCGAGTGATCCACCGGTAAGACTGA2220.2222355697038861No Hit
GCTGCGTTCTTCATCGATGCGTACATAAACTATGTAGGAACGTCCGCGCT2170.2172302640799247No Hit
GCTGCGTTCTTCATCGATTTCGCCCAACAATGCTTCAGGAGAAACGACAA2150.21522814183034017No Hit
GCTGCGTTCTTCATCGATGGGAGAACCAAGAGATCCGTTGTCGAAAGTTG2140.21422708070554788No Hit
GCTGCGTTCTTCATCGATGCTCATCAGGGATATTGGCCTAAAATTTTCTT2030.2032154083328328No Hit
GCTGCGTTCTTCATCGATGCGTTCAATATTGCTATTTACTTTGCAAATTA2010.20121328608324823No Hit
GCTGCGTTCTTCATCGATGCACACAGGAGCTCAGAATATACCTAGTGAAG1850.18519630808657175No Hit
GCTGCGTTCTTCATCGATGCGCCGGACGAAGAAGCGTATTTGAACTGGCA1850.18519630808657175No Hit
GCTGCGTTCTTCATCGATGCAGGTGAAGAGGTCTATGGCGGACAGGTCGT1840.1841952469617795No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCGTTGTTGAAAGTTT1830.1831941858369872No Hit
GCTGCGTTCTTCATCGATGCCCACCATCACCACCAAATCCTTTCGGCCCT1820.18219312471219493No Hit
TCTGCGTTCTTCATCGATGAGTGACTGTTGGGCCCCACTGCTGCGACTCT1820.18219312471219493No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGATATCCGTTGTTAAGAGTCG1720.17218251346427213No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTG1710.17118145233947984No Hit
GCTGCGTTCTTCATCGATGCCGGTCCCCGGCAGGCCCCCAAGATTGCCCA1630.16317296334114162No Hit
GCTGCGTTCTTCATCGATGCCTACCTGGTGGATGACAGCGTGAGTGACAC1570.15716659659238794No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTGAAAGTTG1540.15416341321801108No Hit
GCTGCGTTCTTCATCGATGCGCAGCCAGCCATTCAGACCGATCTGGAAGA1290.1291368850982041No Hit
GCTGCGTTCTTCATCGATGAGTGACTGTTGGGCCCCACTGCTGCTACTCT1130.11311990710152761No Hit
GCTGCGTTCTTCATCGATGCAATGAGCGGAGAAACGACAATCGCCGTTCC1110.11111778485194305No Hit
TCTGCGTTCTTCATCGATGCGTACATAAACTATGTAGGAACGCCCGCGCT1010.10110717360402026No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)