FastQCFastQC Report
Sun 21 May 2023
EGAF00007833506

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007833506
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences107679
Sequences flagged as poor quality0
Sequence length235-238
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGCGTACATAAACTATGTAGGAACGCCCGCGCT2364221.95599884842913No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT1111010.31770354479518No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG83057.712738788435999No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG53995.013976727124137No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCA51734.804093648715162No Hit
GCTGCGTTCTTCATCGATGCGTTTTTGTTCTCTGTTTTTTTCTTTACGCT46854.350894789141801No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGGGCAAACT46054.276599894129775No Hit
GCTGCGTTCTTCATCGATGCGCCTTGAGGTTGTCCATCGTCATCATGGCA32383.007085875611772No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATCAAAATAA29512.740552939756127No Hit
GCTGCGTTCTTCATCGTTTCGAAACGCCTAGGCATCCGCCGTATGCCCTT28072.6068221287344793No Hit
GCTGCGTTCTTCATCGATGAGTGACTGTTGGGCCCCACTGCTGCGACTCT22342.0746849432108396No Hit
GCTGCGTTCTTCATCGACTCCTGACGCCAAGGCATCCACCGTATGCCTTT11461.0642743710472795No Hit
GCTGCGTTCTTCATCGATGGGAGAACCAAGAGATCCGTTGTCGAAAGTTG11131.0336277268548184No Hit
GCTGCGTTCTTCATCGATGCTAGGTTTTTCACTTCTTCTTTTGCTTCAGC9570.8887526815813668No Hit
GCTGCGTTCTTCATCGATGCAATAAGCGGAGAAACAACTATCGCTGTTCC8640.8023848661298861No Hit
GCTGCGTTCTTCATCGATGCAGGTGAAGAGGTCTATGGCGGACAGGTCGT7890.7327334020561113No Hit
GCTGCGTTCTTCATCGACTCTTACTACCTAGGCATCCTTTGTGTGCCCTT6680.6203623733504211No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTGAAAGTTG5550.5154208341459338No Hit
GCTGCGTTCTTCATCGATGCCAGGCAAAAACAGGAACAACACCAACGTGT4840.44948411482276024No Hit
GCTGCGTTCTTCATCGATGCTGTGGTGGTGACGGTGGCTGCTGCGCTGGG4600.4271956463191523No Hit
GCTGCGTTCTTCATCGATGCACTGATCTCGCAGATGAGCGAGCAGCCCAT4570.42440958775620136No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT4340.4030498054402437No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCGTTGTTGAAAGTTT4270.3965490021266914No Hit
GCTGCGTTCTTCATCGATGCGATAAAGGTTGGCATCGTGTTTAATGGGTG4260.39562031593904107No Hit
GCTGCGTTCTTCATCGATGCCGCTGCGGAGGAAGCACTGCCGCTTGAGAA4020.3733318474354331No Hit
GCTGCGTTCTTCATCGATGCCGCCTCCAGACGGAATCTGGAACTCACAGA3750.3482573203688742No Hit
GCTGCGTTCTTCATCGAAACGGATATAGCTTCCGTCTTTTCTTCTTGTCT3740.34732863418122384No Hit
GCTGCGTTCTTCATCGATGCAACCAACCGTTCGGCTGCGTTCTTCATCGA3550.32968359661586755No Hit
GCTGCGTTCTTCATCGATGCAACCAACCGTTCCGCTGCGTTCTTCATCGA3360.31203855905051125No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCATTGCCGAGAGTCA3080.28603534579630197No Hit
GCTGCGTTCTTCATCGATGCAATGAGCGGAGAAACGACAATCGCCGTTCC3030.2813919148580503No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCATTGTTGAAAGTTT2820.2618895049173934No Hit
GCTGCGTTCTTCATCGAAACGGATATAGCTACCATCTTTTCTTCTGGTCT2740.25446001541619073No Hit
GCTGCGTTCTTCATCGATGCGTTCAATATTGCTATTTACTTCGCAAATCA2720.2526026430408901No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTAAAAGTTT2710.25167395685323973No Hit
GCTGCGTTCTTCATCGATGCCCCTTCCTTCCCATGCCTTAGCTTCCTCCT2670.24795921210263838No Hit
GCTGCGTTCTTCATCGATGCCAGCCACAAAACCTGCGGCAACAGTTGTGT2590.24052972260143576No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTG2560.23774366403848476No Hit
GCTGCGTTCTTCATCGATGCACCAACCGTTCGGCTGCGTTCTTCATCGAT2540.2358862916631841No Hit
GCTGCGTTCTTCATCGATGCAACCAACCGTTCTGCTGCGTTCTTCATCGA2400.22288468503607944No Hit
GCTGCGTTCTTCATCGATGCAATTGTTCATGCGGAGCACTTTAGGGGCGT2390.22195599884842912No Hit
GCTGCGTTCTTCATCGATGCATTCAATATTGCTATTTACTTTGCAAATTA2380.2210273126607788No Hit
GCTGCGTTCTTCATCGATGCGTACATAAACTATGTAGGAACGTCCGCGCT2160.20059621653247153No Hit
GCTGCGTTCTTCATCGATGCTTGGGAATAGGTTGCTGAACGAACGACTTT2000.1857372375300662No Hit
GCTGCGTTCTTCATCGATGCAACCAACCGTTCGGCTGCGTTCTTCATCGG1970.18295117896711524No Hit
GCTGCGTTCTTCATCGATGCCGTTTCCGAGGCCGGACGATCGGGCAAACT1970.18295117896711524No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGATGCCGGACGATCGGGCAAACT1890.17552168946591257No Hit
GCTGCGTTCTTCATCGATTCGAAACGCCTAGGCATCCGCCGTATGCCCTT1880.17459300327826224No Hit
GCTGCGTTCTTCATCGATGCCTTGTCGGAGATGATCAGCGCCAGGCCTCG1860.1727356309029616No Hit
GCTGCGTTCTTCATCGGCGCAGTCCTTGTCATTTACTACAAACAAATTTC1800.1671635137770596No Hit
GCTGCGTTCTTCATCGATGCCATCTGGCCATGGTTGAGGAGGGTGGGAGC1750.16252008283880792No Hit
GCTGCGTTCTTCATCGAACCAACCGTTCGGCTGCGTTCTTCATCGAACCA1720.15973402427585692No Hit
GCTGCGTTCTTCATCGATGCACACAGGAGCTCAGAATATACCTAGTGAAG1700.15787665190055628No Hit
GCTGCGTTCTTCATCGATGCAACCAACCGTTCAGCTGCGTTCTTCATCGA1630.15137584858700398No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAAGCCGGACGATCGGGCAAACT1560.14487504527345166No Hit
GCTGCGTTCTTCATCGATGCACCAACCGTTCCGCTGCGTTCTTCATCGAT1550.1439463590858013No Hit
GCTGCGTTCTTCATCGATGCACGAGCCGAGTGATCCACCGCTAAGAGTCG1520.1411603005228503No Hit
GCTGCGTTCTTCATCGATGCCTATCACACCATTTAAGATGTTTTCCTGTG1520.1411603005228503No Hit
GCTGCGTTCTTCATCGATGCTCATCAGGGATATTGGCCTAAAATTTTCTT1450.134659497209298No Hit
TCTGCGTTCTTCATCGATGCGTACATAAACTATGTAGGAACGCCCGCGCT1400.13001606627104634No Hit
GCTGCGTTCTTCATCGATGCTTGGGAATAAGTTGCTGAACGAACGACTCT1360.12630132152044504No Hit
GCTGCGTTCTTCATCGAGGTCTCAAGGTCCTCAGGACGATCGGCGGAGAG1320.12258657676984369No Hit
GCTGCGTTCTTCATCGATGCCTTCCTGAACGTGGACAAAGGATTGGTCAA1300.12072920439454304No Hit
GCTGCGTTCTTCATCGATGCAGCGGTATTCGTATTTGAGGAACACCTTCA1250.1160857734562914No Hit
GCTGCGTTCTTCATCGATGGCTTGTTTTGCCGCTGGCTTCGCTTGCGCTG1200.11144234251803972No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATACGTTGCCGAGAGTCG1190.1105136563303894No Hit
GCTGCGTTCTTCATCGACTCCCAGTGCCAAGGCATCCGCCTTATGCTCTT1180.10958497014273906No Hit
GCTGCGTTCTTCATCGATGCAGCCTTTATCTGCAGCAGCTGGAATCTCTG1170.10865628395508872No Hit
GCTGCGTTCTTCATCGATGCCGTTCACTGCCGATGCCGCATCTTCCTCGT1170.10865628395508872No Hit
GCTGCGTTCTTCATCGTTTCAAAACGCCTAGGCATCCGCCGTATGCCCTT1120.10401285301683708No Hit
GCTGCGTTCTTCATCGATGCAACCAACCGTTCTGCTGCGTTCTTCATCGG1120.10401285301683708No Hit
GCTGCGTTCTTCATCGATGCCTCGATCTCGCTGGCTGCGTTCTTCATCGA1110.10308416682918677No Hit
GCTGCGTTCTTCATCGATGCACCAACCGTTCGGCTGCGTTCTTCATCGGC1100.10215548064153643No Hit
GCTGCGTTCTTCATCGATGCCCTGTGGGTACTTGCCAGCCAAATGAAGAC1090.10122679445388608No Hit
GCTGCGTTCTTCATCGATGCACCAACCGTTCTGCTGCGTTCTTCATCGAT1080.10029810826623577No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)