FastQCFastQC Report
Sun 21 May 2023
EGAF00007833514

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007833514
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences94613
Sequences flagged as poor quality0
Sequence length237-238
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGAGTGACTGTTGGGCCCCACTGCTGCGACTCT3823140.40776637459969No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATCAAAATAA47955.068013909293649No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT47535.023622546584507No Hit
GCTGCGTTCTTCATCGATGCGAGGGTGTCTTGCTGCGTTCTTCATCGATG41104.344011922251699No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG36863.8958705463308423No Hit
GCTGCGTTCTTCATCGATGCCGAGGGTGTCTTGCTGCGTTCTTCATCGAT26752.8273070296893663No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTCCACTTCGCAAATCAAAATAA24862.62754589749823No Hit
GCTGCGTTCTTCATCGATGCGACTATGGTAAGGCGCAGAAACAGTTTGGC20442.1603796518448837No Hit
GCTGCGTTCTTCATCGATGCACGAGCCGAGTGATCCACCGCTAAGAGTCG16431.7365478316933192No Hit
GCTGCGTTCTTCATCGATGCGTTTTGACTTCGCAAATAAAAATAAACTAC11081.1710864257554459No Hit
GCTGCGTTCTTCATCGATGCCTCCCCAGTATCTCCTGCTCTCTTTTGCAT10011.057994144567871No Hit
GCTGCGTTCTTCATCGATGCAGACAACGATCAAATCCAAGCCGCCCATGA9871.043197023664824No Hit
GCTGCGTTCTTCATCGATGCCGCAATGGTAGGGCATTTAGGCTCAGCAGC9721.0273429655544164No Hit
GCTGCGTTCTTCATCGATGTCGGAACCAAGAGATCCGTTGTTGAAAGTTT8710.9205923076110049No Hit
GCTGCGTTCTTCATCGATGCGTGACTGTTGGGCCCCACTGCTGCGACTCT7730.8170124612896748No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAAGCCGGACGATCGGGCAAACT6750.7134326149683446No Hit
GCTGCGTTCTTCATCGATGCATTCAATATTGCTATTTACTTCGCAAATCA5600.591884836121886No Hit
GCTGCGTTCTTCATCGATGCGCTGGGCTATCCCTTCTGTCGTGGTCGTCT5480.5792015896335598No Hit
GCTGCGTTCTTCATCGATGCGTTGATATTCCACTTCGCAAATCAAAATAA5450.5760307780114784No Hit
GCTGCGTTCTTCATCGATGCATATGTGGTGTGGCCCACATTTCTGTATGC4880.5157853571919292No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTGAAAGTTG4820.5094437339477662No Hit
GCTGCGTTCTTCATCGTTTCGAAACGCCTAGGCATCCGCCGTATGCCCTT4810.5083867967404057No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT4060.42911650618836733No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG4050.42805956898100683No Hit
GCTGCGTTCTTCATCGATGCGTTCAATATTGCTATTTACTTCGCAAATCA3820.4037500132117151No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTG3560.37626964582034184No Hit
GCTGCGTTCTTCATCGACTCTTACTACCTAGGCATCCTTTGTGTGCCCTT3400.35935865050257365No Hit
GCTGCGTTCTTCATCGATGCCGATGTTGCCCAGCTCAACACAACTGCTGG3030.3202519738302348No Hit
GCTGCGTTCTTCATCGATGCGAGGGTGTCTTGCTGCGTTCTTCATCGGCT3000.3170811622081532No Hit
GCTGCGTTCTTCATCGATGCTTATAAATGTATGTTCTGTGTCTGGTCACA2740.2896007948167799No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCATTGTTGAAAGTTT2690.2843161087799774No Hit
GCTGCGTTCTTCATCGATGGGAGAACCAAGAGATCCGTTGTTGAAAGTTG2630.27797448553581433No Hit
GCTGCGTTCTTCATCGATGCCGAGGGTGTCTTGCTGCGTTCTTCATCGGC2620.27691754832845383No Hit
GCTGCGTTCTTCATCGTTTCAAAACGCCTAGGCATCCGCCGTATGCCCTT2520.2663481762548487No Hit
GCTGCGTTCTTCATCGATGTCCCCCTCTGCCTGCTGCGTCTTCTCCACCT2360.2494371809370805No Hit
GCTGCGTTCTTCATCGACTCCTGACGCCAAGGCATCCACCGTATGCCTTT2210.2335831228266729No Hit
GCTGCGTTCTTCATCGATGCAAATATGGTTCATCCACCGGCAATGAGACA2130.22512762516778878No Hit
GCTGCGTTCTTCATCGATGCCCAGCTGGGAGCTGTGCGTTTTTCTCTCTG2080.2198429391309862No Hit
GCTGCGTTCTTCATCGACGAGGGTGTCTTGCTGCGTTCTTCATCGACGAG2060.2177290647162652No Hit
GCTGCGTTCTTCATCGATGAGTGACTGTTGTGCCCCACTGCTGCGACTCT2060.2177290647162652No Hit
GCTGCGTTCTTCATCGACTCCCAGAGATGCCTACCTTTATGGCTGAGCTC2020.21350131588682317No Hit
GCTGCGTTCTTCATCGATGCAGACCTGTGTCTACCCTCGTGTGACACTGG2010.21244437867946267No Hit
GCTGCGTTCTTCATCGATGCTTGCCAGTTGCCCAACGCCCAACGTTTCAA1970.20821662985002062No Hit
GCTGCGTTCTTCATCGATGAGTGACTGTTGGGCCCCACTTCTGCGACTCT1920.20293194381321805No Hit
GCTGCGTTCTTCATCGATGCCAGGCAAACAAAGGAACAACACATGCGTGT1910.20187500660585755No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGGTATCCGTTGCTGAGAGTCG1900.20081806939849703No Hit
GCTGCGTTCTTCATCGATGCTCATTATCTTTTTTTTTTGGTAATAGTTAT1820.19236257173961294No Hit
GCTGCGTTCTTCATCGATGCGGGCGAGAAGGTCTATATGGGCATGATCGT1770.1870778857028104No Hit
GCTGCGTTCTTCATCGATGCGGGAGCCAAGATATCCGTTGTTGAGAGTTG1740.18390707408072887No Hit
GCTGCGTTCTTCATCGATGCAGTGCACGAACCAGTGGGAGAACTCGCCGT1720.18179319966600785No Hit
GCTGCGTTCTTCATCGATGCTGACATTGTGTATGTTTCTGAATATTTTCT1620.17122382759240273No Hit
GCTGCGTTCTTCATCGATGCGCAGCCAGCCATTCAGACCGATCTGGAAGA1530.16171139272615814No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCGTTGTTGAAAGTTT1490.1574836438967161No Hit
GCTGCGTTCTTCATCGATGCCATGCCCGAACAACTGAAAGAGGTGGCAGT1390.14691427182311098No Hit
GCTGCGTTCTTCATCGATGCCTGGGTGAGCAGGTGGAATTACCTGTCTAG1380.14585733461575046No Hit
GCTGCGTTCTTCATCGATGCGCAGGAGCTGGTTGTACTTCGCGACGCGCT1370.14480039740838996No Hit
GCTGCGTTCTTCATCGATGCCAAAGGGTTCAGGATTTCCTCCGCCCTCCC1370.14480039740838996No Hit
GCTGCGTTCTTCATCGACGACAGTCTCGACTATCTCGAGCGAATCGACGA1280.13528796254214537No Hit
GCTGCGTTCTTCATCGATGCACACATGGGGGCCACGTCAGGTGACCACTC1210.1278894020906218No Hit
GCTGCGTTCTTCATCGATGCACACAGGAGCTCAGAATATACCTAGTGAAG1200.12683246488326128No Hit
GCTGCGTTCTTCATCGATGAGTGACTGTTGGGCCCCACTGCTGTGACTCT1100.11626309280965619No Hit
GCTGCGTTCTTCATCGATGCACATGACTAAGCCTTGCTGTGGGAAAGGAT1100.11626309280965619No Hit
GCTGCGTTCTTCATCGATGCTCATTATCTTTTTTTTTTTTGGTAATAGTT1080.11414921839493516No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTAAAAGTTT1080.11414921839493516No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)