FastQCFastQC Report
Sun 21 May 2023
EGAF00007833525

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007833525
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences776098
Sequences flagged as poor quality0
Sequence length247-250
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGAAGTAAAAGTCGTAACAAGGTAGCCGTAGGGGAACCTGCGGCTGGATC22514829.010253859692973No Hit
GGAAGTAAAAGTCGTAACAAGGATGTTGCGTTAAGGTTTCGGATAAAGCA10835713.961767714901985No Hit
GGAAGTAAAAGTCGTAACAAGGCATCGATGAAGAACGCAGCGAATCCGTC745489.605487966725851No Hit
GGAAGTAAAAGTCGTAACAAGGAAAACAGTGAACAGCCTCAGTTCCCTGG572547.3771611317127475No Hit
GGAAGTAAAAGTCGTAACAAGGTATCCGTACGGGAACGTGCGGATGGATC449375.790119289058856No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATC360014.63871830619329No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTATCGGAAGGTGCGGCTGGATC260393.355117523817868No Hit
GGAAGTAAAAGTCGTAACAAGGCTACGGAAAAAAAGGTTTTGGTGGGCAA133321.7178242953853766No Hit
GGAAGTAAAAGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATC123741.594386275959995No Hit
GGAAGTAAAAGTCGTAACAAGGATGTGCATGTACCCATCGTAAAGCGAAG123551.591938131524627No Hit
GGAAGTAAAAGTCGTAACAAGGAGTAAAAAGCATCGATGAAGAACGCAGC105131.3545969710010848No Hit
GGAAGTAAAAGTCGTAACAAGGAGCATCGATGAAGAACGCAGCGAATCCG85221.098057204115975No Hit
GGAAGTAAAAGTCGTAACAAGGCATCGAAGGTTTGGTACACGTTTCCGAA83231.0724161123981766No Hit
GGAAGTAAAAGTCGTAACAAGGATAACGTGGAATTTGGGACTCAGCCAAC54720.7050655973858971No Hit
GGAAGTAAAAGTCGTAACAAGGATAGAGACTTGGTATGAGTGCTGGAAGG44660.5754427920185337No Hit
GGAAGTAAAAGTCGTAACAAGGACGCACATCATGATGCTCAGGAAGCTGG41970.5407822208020121No Hit
GGAAGTAAAAGTCGTAACAAGGTATCCCTACGAGAACGTGGGGATGGATC39860.5135949325987182No Hit
GGAAGTAAAAGTCGTAACAAGGAACGAAGATGAAGGACACCTCTCCGGCA39050.5031581063216243No Hit
GGAAGTAAAAGTCGTAACAAGGAGTAAACATCGATGAAGAACGCAGCGAA37500.4831864017173089No Hit
GGAAGTAAAAGTCGTAACAAGGAGTAAGCATCGATGAAGAACGCAGCGAA36240.46695133861960736No Hit
GGAAGTAAAAGTCGTAACAAGGTATCCGTACGTGAACGTGCGGATGGACT34800.44839698079366264No Hit
GGAAGTAAAAGTCGTAACAAGGAGGCATCGATGAAGAACGCAGCGAATCC32190.4147672072341379No Hit
GGAAGTAAAAGTCGTAACAAGGATGTTGCGTCAAGGTTTCGGATAAAGCA31300.40329958330004717No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTACCGGAAGGTGCGGCTGGATC30740.39608399970106867No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTACCGGAAGGTGCGGCTGGAAC20760.2674919919907022No Hit
GGAAGTAAAAGTCGTAACAAGGTGACCAACGTAGCCGATGGCGATCTTAA18040.23244487165280672No Hit
GGAAGTAAAAGTCGTAACAAGGAGTAAAGCATCGATGAAGAACGCAGCGA18000.23192947282430826No Hit
GGAAGTAAAAGTCGTAACAAAGCTGAGTTGCACAAACTCTTTTTTGATTT17720.22832168102481903No Hit
GGAAGTAAAAGTCGTAACAAGGCTGAGTTGCACAAACTCTTTTTTGATTT17690.2279351319034452No Hit
GGAAGTAAAAGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGCTGGATC15760.20306713842839436No Hit
GGAAGTAAAAGTCGTAACAAGAGCAGAAGGAATTCAGAAGAGCCAGGGTG14290.18412623148107585No Hit
GGAAGTAAAAGTCGTAACAAGGTATCCGTACCGGAAGGTGCGGATGGATC13420.17291630696123428No Hit
GGAAGTAAAAGTCGTAACAAGGTGCGAGACCTCGAAGACCTGATGGAAAA12640.16286602980551426No Hit
GGAAGTAAAAGTCGTAACAAGGGCATCGATGAAGAACGCAGCGAATCCGT12350.1591293882989004No Hit
GGACGTAAAAGTCGTAACAAGGTAGCCGTAGGGGAACCTGCGGCTGGATC11690.15062530762867576No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTAGGGGACCCTGCGGCTGGATC11410.14701751582918654No Hit
GGAAGTAAAAGTCGTAACAAGGAGGGTATAAGGTTTCCATAATATGGCTG10900.14044618076583112No Hit
GGAAGTAAAAGTCGTAACAAGGTCTCCGTAGGTGAACCTGCGGAGGGATC9580.12343801942538185No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTAGGGGAACCTGCGGCTGTATC9300.11983022762589261No Hit
GGAAGTAAAAGTCGTAACAAGGAGTAGCATCGATGAAGAACGCAGCGAAT9090.11712438377627567No Hit
GGAAGTAAAAGTCGTAACAAGGTACCCGAATGCCGGATTCCTCGCTAACA8320.10720295632768027No Hit
GGAAGTAAAAGTCGTAACAAGGAGTAAAATCGATGAAGAACGCAGCGAAT8200.10565675984218488No Hit
GGAAGTAAAAGTCGTAACAAGGAGTAAAAACGATGAAGAACGCAGCGAAT8100.10436826277093873No Hit
GGAAGTAAAAGTCGTAACAAGGAGTAAATCGATGAAGAACGCAGCGAATC8060.10385286394244027No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)