FastQCFastQC Report
Sun 21 May 2023
EGAF00007833529

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007833529
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences102848
Sequences flagged as poor quality0
Sequence length247-250
%GC56

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATC3517334.19901213441195No Hit
GGAAGTAAAAGTCGTAACAAGGAAAACAGTGAACAGCCTCAGTTCCCTGG2169621.095208462974487No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTAGGGGAACCTGCGGCTGGATC1781317.319733976353454No Hit
GGAAGTAAAAGTCGTAACAAGGGCGGCGAAGACGTCGAGGAAGAAGCGGC46674.537764467952707No Hit
GGAAGTAAAAGTCGTAACAAGGAACGAAGATGAAGGACACCTCTCCGGCA38933.7851975731176104No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTATCGGAAGGTGCGGCTGGATC28042.7263534536403236No Hit
GGAAGTAAAAGTCGTAACAAGGTGTTGAAACACTTTGATGTCAAAAACCT8540.8303515868077163No Hit
GGAAGTAAAAGTCGTAACAAGGACATTCAAAAGGGGAGCGCGCGGAAGTG5610.5454651524579962No Hit
GGAAGTAAAAGTCGTAACAAGGTCTCCGTAGGTGAACCTGCGGAGGGATC3790.3685049782202863No Hit
GGAAGTAAAAGTCGTAACAAGGGCCAGCGAATCTAATAATGAAGAATCAG3750.3646157436216553No Hit
GGAAGTAAAAGTCGTAACAAGGACGCACATCATGATGCTCAGGAAGCTGG3590.3490588052271313No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCTGTAGGTGAACCTGCAGAAGGATC3480.3383634100808961No Hit
GGAAGTAAAAGTCGTAACAAGGCACTGAAGGGGAAGGGAGGGAAGACGAT3450.33544648413192285No Hit
GGAAGTAAAAGTCGTAACAAGGATAGGTGAAATCTCAGAGAAAGCGTAGA2760.26835718730553826No Hit
GGAAGTAAAAGTCGTAACAAGGCAAAAATAGACAAGTGGGACTATATCAA2730.265440261356565No Hit
GGAAGTAAAAGTCGTAACAAGGGATAACTCATGGCTCAAGCAGAGCAAAA2550.24793870566272558No Hit
GGAAGTAAAAGTCGTAACAAGGGGTGGGGCGGAAATGGTCGATGACGTGT2520.24502177971375233No Hit
GGAAGTAAAAGTCGTAACAAGGTATCCGTACGGGAACGTGCGGATGGATC2410.23432638456751714No Hit
GGAAGTAAAAGTCGTAACAAGGCGGCGAAGACGTCGAGAAGGAAGCGGCA2350.22849253266957062No Hit
GGAAGTAAAAGTCGTAACAAGGCTTCGGAGTAGACCATTTAGTGAATGGA2230.21682482887367766No Hit
GGAAGTAAAAGTCGTAACAAGGTCTCCGTTGGTGAACCAGCGGAGGGATC1930.18765556938394526No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTACCGGAAGGTGCGGCTGGATC1880.18279402613565648No Hit
GGAAGTAAAAGTCGTAACAAGGAACATGACGCTGATGCCGATTTTCACCA1860.180849408836341No Hit
GGAAGTAAAAGTCGTAACAAGGCCCACCAAATCGGGATATCGGCACTTAC1850.17987710018668326No Hit
GGAAGTAAAAGTCGTAACAAGGATAGGTGAAATCTCAGAGAAAGGGTAGA1810.17598786558805227No Hit
GGAAGTAAAAGTCGTAACAAGGACAAGGGCACAAAGGAAAACACTCATTA1770.17209863098942127No Hit
GGAAGTAAAAGTCGTAACAAGGATGCTGCAGCTCTCAAGGCCGAGGACGG1540.1497355320472931No Hit
GGAAGTAAAAGTCGTAACAAGGTGTACATAAAAGGCGACGGCGGAAAATG1460.14195706285003112No Hit
GGAAGTAAAAGTCGTAACAAGGGCCGTGAAGTAAGAGGGAAGCATATTGA1460.14195706285003112No Hit
GGAAGTAAAAGTCGTAACAAGGTACCCGAATGCCGGATTCCTCGCTAACA1440.14001244555071563No Hit
GGAAGTAAAAGTCGTAACAAGGGCACAAAGGAAAACACTCATTAGAAGCA1400.13612321095208463No Hit
GGAAGTAAAAGTCGTAACAAGGAGGAACCAACATGACTGATGAAGAAAAA1390.13515090230242688No Hit
GGAAGTAAAAGTCGTAACAAGGGGAATGAAGAGGAGCATAAGTAAATAAT1250.12153858120721843No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCAGAAGGATC1210.11764934660858743No Hit
GGAAGTAAAAGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATC1190.11570472930927193No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCAAGATCGACGAGGACTATACCAA1050.10209240821406347No Hit
GGAAGTAAAAGTCGTAACAAGGAAGCGGCAGAGCAGCACGCGGTGCAGGC1050.10209240821406347No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)