FastQCFastQC Report
Sun 21 May 2023
EGAF00007833532

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007833532
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences72924
Sequences flagged as poor quality0
Sequence length237-238
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGAGTGACTGTTGGGCCCCACTGCTGCGACTCT919712.611760188689594No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG821111.259667599144315No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG757910.393011902802918No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATCAAAATAA740510.15440732817728No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGGGCAAACT56567.756019965991992No Hit
GCTGCGTTCTTCATCGATGCAGATTCGGTTACGCTGCGTTCTTCATCGAT33374.575996928308925No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTAAAAGTTT32354.436125281114585No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT27683.7957325434699136No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT27373.753222533048105No Hit
GCTGCGTTCTTCATCGATGGGAGAACCAAGAGATCCGTTGTCGAAAGTTG25333.473479238659426No Hit
GCTGCGTTCTTCATCGATGCACGAGCCGAGTGATCCACCGCTAAGAGTCG23243.1868794909769074No Hit
GCTGCGTTCTTCATCGATGCTCATCAGGGATATTGGCCTAAAATTTTCTT15552.1323569743842903No Hit
GCTGCGTTCTTCATCGAAGAAAGGCACTGGTAGGCCTAAGTGGACTTGAA11391.561900060336789No Hit
GCTGCGTTCTTCATCGATGCAGATTCGGTTACGCTGCGTTCTTCATCGGC8871.2163348143272448No Hit
GCTGCGTTCTTCATCGATGCCCCTTCCTTCCCATGCCTTAGCTTCCTCCT7641.0476660632987769No Hit
GCTGCGTTCTTCATCGACTCTTACTACCTAGGCATCCTTTGTGTGCCCTT4320.59239756458779No Hit
GCTGCGTTCTTCATCGATGCTAGTGCCAAGAGATCCATTGTCAAAAGTTG4300.589654983270254No Hit
GCTGCGTTCTTCATCGATGCCTATCACACCATTTAAGATGTTTTCCTGTG4110.5636004607536613No Hit
GCTGCGTTCTTCATCGATGCACACAGGAGCTCAGAATATACCTAGTGAAG4050.5553727168010532No Hit
GCTGCGTTCTTCATCGATGCCGTTTCCGAGGCCGGACGATCGGGCAAACT3720.510120125061708No Hit
GCTGCGTTCTTCATCGATGCCATCTGGCCATGGTTGAGGAGGGTGGGAGC3520.48269431188634737No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAAGCCGGACGATCGGGCAAACT3520.48269431188634737No Hit
GCTGCGTTCTTCATCGATGCAGACCTGTGTCTACCCTCGTGTGACACTGG3480.4772091492512753No Hit
GCTGCGTTCTTCATCGATGCATATGTGGTGTGGCCCACATTTCTGTATGC3220.4415555921233065No Hit
GCTGCGTTCTTCATCGATGAGATTCGGTTACGCTGCGTTCTTCATCGATG3180.4360704294882343No Hit
GCTGCGTTCTTCATCGATGCTTCTTGAATAGTAACCTTTTCTAAGCACTA3090.423728813559322No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCATTGTTGAAAGTTT2930.4017881630190335No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCGTTGTTGAAAGTTT2850.39081783774888923No Hit
GCTGCGTTCTTCATCGATGCATCTGAGAATTTCTCGGCTTCTACGGGAGC2800.38396138445504907No Hit
GCTGCGTTCTTCATCGATGCGTGACTGTTGGGCCCCACTGCTGCGACTCT2420.3318523394218639No Hit
GCTGCGTTCTTCATCGATGCAGATTCGGTTACGCTGCGTTCTTCATCGCC2080.28522845702375077No Hit
GCTGCGTTCTTCATCGATGCCACCACCTCAATGCCATCTCGCTGATCTGG2070.2838571663649827No Hit
GCTGCGTTCTTCATCGATGCAGATTCGGTTACGCTGCGTTCTTCATCCTT1910.2619165158246942No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGATATATCCGTTGCCGAGAGTCG1770.24271844660194172No Hit
GCTGCGTTCTTCATCGATGCGATAAAGGTTAGCATCGTGTTTAATGGGTG1670.22900554001426143No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCA1180.16181229773462785No Hit
GCTGCGTTCTTCATCGATGCTCATTATCTTTTTTTTTTGGTAATAGTTAT1180.16181229773462785No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCACTGTTGAAGGTTG1160.15906971641709175No Hit
GCTGCGTTCTTCATCGACGCACGAGCCGAGTGATCCACCGCTAAGAGTCG1080.1480993911469475No Hit
GCTGCGTTCTTCATCGATGCGGGAGCCAAGATATCCGTTGTTGAGAGTTG1070.14672810048817947No Hit
GCTGCGTTCTTCATCGATGCGGTACCGACTTCGAAGACTTGCAGGATGGC910.12478744994789095No Hit
GCTGCGTTCTTCATCGATGCCTTCTTGCAGCGCCGTGACGGCTGCGCGCT890.1220448686303549No Hit
GCTGCGTTCTTCATCGATGTGGGAACCAAGAGATCCGTTGTTGAAAGTTT840.11518841533651474No Hit
GCTGCGTTCTTCATCGAGGTCGATGAAGGAGTCATAGCGCTCGGAGCGCA820.11244583401897866No Hit
GCTGCGTTCTTCATCGAGGATGGGAGGGTCGCGAACTATGATCCGACAGC810.11107454336021062No Hit
GCTGCGTTCTTCATCGATGCGATTCGGTTACGCTGCGTTCTTCATCGATG760.10421809006637046No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)