FastQCFastQC Report
Sun 21 May 2023
EGAF00007833549

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007833549
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences276025
Sequences flagged as poor quality0
Sequence length247-250
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGAAGTAAAAGTCGTAACAAGGTAGCCGTATCGGAAGGTGCGGCTGGATC8547630.966760257223076No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCTGTAGGTGAACCTGCAGAAGGATC5672620.55103704374604No Hit
GGAAGTAAAAGTCGTAACAAGGAACGAAGATGAAGGACACCTCTCCGGCA4743517.185037587175074No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATC3460112.535458744678923No Hit
GGAAGTAAAAGTCGTAACAAGGGATAACTCATGGCTCAAGCAGAGCAAAA220027.9710171180146725No Hit
GGAAGTAAAAGTCGTAACAAGGTATCCGTACGGGAACGTGCGGATGGATC28071.0169368716601757No Hit
GGAAGTAAAAGTCGTAACAAGGACATTCAAAAGGGGAGCGCGCGGAAGTG25400.9202065030341454No Hit
GGAAGTAAAAGTCGTAACAAGGAGGATCTTAGCACATGCACATAGAAACA15620.5658907707635178No Hit
GGAAGTAAAAGTCGTAACAAGGGATAACACATGGCTCAAGCAGAGCAAAA13950.5053890046191468No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTAGGGGAACCTGCGGCTGGATC10360.37532832170999003No Hit
GGAAGTAAAAGTCGTAACAAGGGCGGGTGTGGTGTTCCAAGCAAGGCAGG6940.2514265012227153No Hit
GGAAGTAAAAGTCGTAACAAGGAAGACAACTGAGGAATGGTGATGTTGCG5840.21157503849289014No Hit
GGAAGTAAAAGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGAAGGATC5550.20106874377320894No Hit
GGAAGTAAAAGTCGTAACAAGGTAACCGTATCGGAAGGTGCGGCTGGATC4990.18078072638347975No Hit
GGAAGTAAAAGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATC4950.1793315822842134No Hit
GGAAGTAAAAGTCGTAACAAGGCAAGTTAATAATGCCGTCCTCGCCCATC3880.14056697762883796No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTACCGGAAGGTGCGGCTGGATC3620.13114754098360656No Hit
GGAAGTAAAAGTCGTAACAAGGTATCCGTATCGGAAGGTGCGGCTGGATC3370.12209039036319173No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCAAGGTTGTCCCACAATCGGATTTC3260.11810524409020921No Hit
GGAAGTAAAAGTCGTAACAAGGTCTCCGTTGGTGAACCAGCGGAGGGATC3200.11593152794130966No Hit
GGAAGTAAAAGTCGTAACAAGGTTCCAGACCGAAGAGATAGAGCTGCGAT3110.11267095371796033No Hit
GGAAGTAAAAGTCGTAACAAGGTCTCCGTAGGTGAACCTGCGGAGGGATC3110.11267095371796033No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)