FastQCFastQC Report
Sun 21 May 2023
EGAF00007833564

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007833564
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences143883
Sequences flagged as poor quality0
Sequence length235-238
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTAAAAGTTT2876119.989157857425823No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAAGCCGGACGATCGGGCAAACT1989213.825121800351676No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT141519.835074331227457No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT89756.23770702584739No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG65564.556479917710917No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG45703.1761917669217348No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCATTGTTGAAAGTTT44793.1129459352390483No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCGTTGTTGAAAGTTT43593.0295448385146266No Hit
GCTGCGTTCTTCATCGATGGGAGAACCAAGAGATCCGTTGTCGAAAGTTG42282.938498641257133No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTGAAAGTTG41242.8662176907626336No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATCAAAATAA31582.194838862131037No Hit
GCTGCGTTCTTCATCGAAACGGATATAGCTTCCGTCTTTTCTTCTTGTTT27021.8779146945782337No Hit
GCTGCGTTCTTCATCGATGCGTTTTTGTTCTCTGTTTTTTTCTTTACGCT23521.6346614957986696No Hit
GCTGCGTTCTTCATCGATGCCGTTTCCGAGGCCGGACGATCGGGCAAACT21651.5046947867364455No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTG20201.4039184615277691No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTG17611.2239110944308917No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGGGCAAACT16391.1391199794277294No Hit
GCTGCGTTCTTCATCGACGACAGTCTCGACTATCTCGAGCGAATCGACGA14891.034868608522202No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCACTGTTGAAGGTTG11770.818025757038705No Hit
GCTGCGTTCTTCATCGAAACGGATATAGCTACCGTCTTTTCTTCTTGTTT10320.7172494318300286No Hit
GCTGCGTTCTTCATCGAAACGGATATAACTACCATCTTTTCTTCTGGTCT10290.715164404411918No Hit
GCTGCGTTCTTCATCGACTCTTACTACCTAGGCATCCTTTGTGTGCCCTT10030.6970941667882933No Hit
GCTGCGTTCTTCATCGATGCTCTCGATAGGCTGGCTGCGTTCTTCATCGA9260.6435784630567892No Hit
GCTGCGTTCTTCATCGATAAAGTCGAGAGAAATTTGCTCCTGTCCGAGGT5190.36070974333312483No Hit
GCTGCGTTCTTCATCGAGGTAGTGTCGTGCTTCGGGAGGTTTTCCCACAC5040.35028460624257207No Hit
GCTGCGTTCTTCATCGATGCTGTCCGATGTTACGGTAGTGGGCGTCTTCA3740.25993341812444837No Hit
GCTGCGTTCTTCATCGATGCTCTCGATAGGCTGGCTGCGTTCTTCATCGG3450.23977815308271305No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTCGAAAGTTG3450.23977815308271305No Hit
GCTGCGTTCTTCATCGATGCCATCTGGCCATGGTTGAGGAGGGTGGGAGC3430.2383881348039727No Hit
GCTGCGTTCTTCATCGATGCCGGTAACGTCTGGCTCCTTCGTCCCGATGC3370.23421807996775157No Hit
GCTGCGTTCTTCATCGATGCTCTCGATAGGCTCGCTGCGTTCTTCATCGA3340.232133052549641No Hit
GCTGCGTTCTTCATCGATGCTCTCGATAGGCTTGCTGCGTTCTTCATCGA3310.23004802513153047No Hit
GCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGAAAGTTT3240.2251829611559392No Hit
GCTGCGTTCTTCATCGATGCCCCTTCCTTCCCATGCCTTAGCTTCCTCCT2990.20780773267168465No Hit
GCTGCGTTCTTCATCGATGCTAGTGCCAAGAGATCCATTGTCAAAAGTTG2780.1932125407449108No Hit
GCTGCGTTCTTCATCGAAACGGATATAGCTTCCGTCTTTTCTTCTTGTCT2760.19182252246617043No Hit
GCTGCGTTCTTCATCGATGCTCTCGATAGGCTAGCTGCGTTCTTCATCGA2760.19182252246617043No Hit
GCTGCGTTCTTCATCGAAACGGATATAGCTACCATCTTTTCTTCTGGTCT2720.18904248590868972No Hit
GCTGCGTTCTTCATCGATGCGCCCTCAAAACTAGACAATGCAAAACTTGG2390.16610718430947366No Hit
GCTGCGTTCTTCATCGATGCCTCATCATAGTCGCCATAACCATGAAGGCT2200.1529020106614402No Hit
GCTGCGTTCTTCATCGATGGGAGAACCAAGAGATCCGTTGTTGAAAGTTG2190.15220700152207No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTT2160.15012197410395947No Hit
GCTGCGTTCTTCATCGATGCACGAGCCGAGTGATCCACCGCTAAGAGTCG2010.1396968370134067No Hit
GCTGCGTTCTTCATCGATGCCCACGCCGGTACGCTCGGCACGCTCGGCGC1730.12023658111104162No Hit
GCTGCGTTCTTCATCGAAGAAAGGCACTGGTAGGCCTAAGTGGACTTGAA1690.11745654455356089No Hit
GCTGCGTTCTTCATCGATGCTAGGTTTTTTACTTCTTCTTTTGCTTCAGC1520.10564138918426778No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)