FastQCFastQC Report
Sun 21 May 2023
EGAF00007833585

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007833585
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences101372
Sequences flagged as poor quality0
Sequence length247-250
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGAAGTAAAAGTCGTAACAAGGAACGAAGATGAAGGACACCTCTCCGGCA2649526.136408475713214No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATC2455824.22562443278223No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTAGGGGAACCTGCGGCTGGATC80257.916387168054295No Hit
GGAAGTAAAAGTCGTAACAAGGTATCCGTACGGGAACGTGCGGATGGATC61806.0963579686698495No Hit
GGAAGTAAAAGTCGTAACAAGGACATTCAAAAGGGGAGCGCGCGGAAGTG61196.036183561535729No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTATCGGAAGGTGCGGCTGGATC51355.0655013218640255No Hit
GGAAGTAAAAGTCGTAACAAGGCATCGAAGGTTTGGTACACGTTTCCGAA22152.185021504952058No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCTGTAGGTGAACCTGCAGAAGGATC17321.7085585763327151No Hit
GGAAGTAAAAGTCGTAACAAGGCTCAAGTTGAAAAACGCTTGAACCAAGT12861.268594878270134No Hit
GGAAGTAAAAGTCGTAACAAGGGATAACTCATGGCTCAAGCAGAGCAAAA12861.268594878270134No Hit
GGAAGTAAAAGTCGTAACAAGGATAAAACCCAAAATAAGCCGGCAGTTGT10981.0831393284141577No Hit
GGAAGTAAAAGTCGTAACAAGGAAAGGAAACAGAATCCGAAAAAAGCACA10471.0328295781872707No Hit
GGAAGTAAAAGTCGTAACAAGGTCTCCGTTGGTGAACCAGCGGAGGGATC9240.9114942982283077No Hit
GGAAGTAAAAGTCGTAACAAGGCCCACCAAATCGGGATATCGGCACTCAC7070.6974312433413566No Hit
GGAAGTAAAAGTCGTAACAAGGAAGGAGCATATATGATTCAGCAGGAAAC5230.5159215562482736No Hit
GGAAGTAAAAGTCGTAACAAGGAAAGAAAACAGAATCCGAAAAGAGCACA4970.4902734482894685No Hit
GGAAGTAAAAGTCGTAACAAGGTATCAGTAGGTGAACCTGCTGATGGATC4440.4379907666811348No Hit
GGAAGTAAAAGTCGTAACAAGGTATCCGTACCGGAAGGTGCGGATGGATC3680.3630193741861658No Hit
GGAAGTAAAAGTCGTAACAAGGAAGCGCAGGTGCTGCAGGACGGTCGTCA3100.3058043641242158No Hit
GGAAGTAAAAGTCGTAACAAGGGCTGGAACAAGTATTTACGAAACCTTAA3090.3048178984334925No Hit
GGAAGTAAAAGTCGTAACAAGGGGGCTGTTGCGGGCAGGTGTCGTTTTGT2310.22787357455707694No Hit
GGAAGTAAAAGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGCTGGATC2100.20715779505188808No Hit
GGAAGTAAAAGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATC2100.20715779505188808No Hit
GGAAGTAAAAGTCGTAACAAGGTCTCCGTAGGTGAACCTGCGGAGGGATC2040.20123900090754845No Hit
GGAAGTAAAAGTCGTAACAAGGGAGAAAACTGTGAATGTGAGCGAAGAAG1950.19236080969103894No Hit
GGAAGTAAAAGTCGTAACAAGGTGGCTGAACTGACGTGGGAACAGGTCCG1750.17263149587657342No Hit
GGAAGTAAAAGTCGTAACAAGGAGTACGTGAACGAGAAAGCACTGCTTTC1670.1647397703507872No Hit
GGAAGTAAAAGTCGTAACAAGGCATCGATGAAGAACGCAGCTTCCAGGTT1640.16178037327861736No Hit
GGAAGTAAAAGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGAAGGATC1510.1489563192992148No Hit
GGAAGTAAAAGTCGTAACAAGGACAATGTGTCGTTATCGATTACGGTATC1470.14501045653632166No Hit
GGAAGTAAAAGTCGTAACAAGGTTGGCGGGATTTACACAGTTCTTTCGAC1420.14007812808270528No Hit
GGAAGTAAAAGTCGTAACAAGAGCAGAAGGAATTCAGAAGAGCCAGGGTG1410.139091662391982No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTACGGGAACGTGCGGCTGGATC1300.12824053979402597No Hit
GGAAGTAAAAGTCGTAACAAGGCCCACCAAATCGGGATATCGGCACTTAC1240.1223217456496863No Hit
GGAAGTAAAAGTCGTAACAAGGCATCGGCATGAAACTCACCGAAAGCTAC1130.11147062305173025No Hit
GGAAGTAAAAGTCGTAACAAGGGGTGGGGCGGAAATGGTCGATGATGTGT1110.1094976916702837No Hit
GGAAGTAAAAGTCGTAACAAGGTGCAGCAATGTTATAACCGCGATTGGAT1090.10752476028883715No Hit
GGAAGTAAAAGTCGTAACAAGGAGGGCGTCACATACAGCGTGAAGGAGGA1080.10653829459811388No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTACCGGAAGGTGTGGCTGGAAC1070.1055518289073906No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTACCGGAAGGTGCGGCTGGATC1060.10456536321666733No Hit
GGAAGTAAAAGTCGTAACAAGGAACGAAGATGAAGGACACCTCTCCGGAA1050.10357889752594404No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)