FastQCFastQC Report
Sun 21 May 2023
EGAF00007833586

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007833586
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences101372
Sequences flagged as poor quality0
Sequence length235-238
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGCCGCTTCCGAAGCCGGACGATCGGGCAAACT2190921.612476818056265No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT1851918.26835812650436No Hit
GCTGCGTTCTTCATCGATGCGTTGATATTTCACTTCGCAAATCAAAATAA69406.84607189361954No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG61236.040129424298623No Hit
GCTGCGTTCTTCATCGAAGAAAGGCACTGGTAGGCCTAAGTGGACTTGAA46474.584106064791067No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG32543.209959357613542No Hit
GCTGCGTTCTTCATCGACTCTTACTACCTAGGCATCCTTTGTGTGCCCTT27752.737442291757093No Hit
GCTGCGTTCTTCATCGATGCCGTTTCCGAGGCCGGACGATCGGGCAAACT23452.313262044746084No Hit
GCTGCGTTCTTCATCGATGCCGCCAGGCAGACCTACGAATACGCCGAAGT21572.1278064948901076No Hit
GCTGCGTTCTTCATCGATGCCTAACCTGGAAGCTGCGTTCTTCATCGATG18121.7874758315905772No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGGGCAAACT17081.6848833997553565No Hit
GCTGCGTTCTTCATCGATGGGAGAACCAAGAGATCCGTTGTCGAAAGTTG16041.5822909679201358No Hit
GCTGCGTTCTTCATCGATGCCCTAACCTGGAAGCTGCGTTCTTCATCGAT15031.4826579331570848No Hit
GCTGCGTTCTTCATCGATGCGTTTTTGTTCTCTGTTTTTTTCTTTACGCT14441.4244564574044116No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATCAAAATAA13341.3159452314248512No Hit
GCTGCGTTCTTCATCGATGCCAGTTGGCGGGTGAATACTGTAATGTCTTC11751.15909718659985No Hit
GCTGCGTTCTTCATCGATGCTGTTTAATTTTTCAAGAACGAGTTCGTAAT11581.1423272698575544No Hit
GCTGCGTTCTTCATCGATGCTGTCCGATGTTACGGTAGTGGGCGTTTTCA10981.0831393284141577No Hit
GCTGCGTTCTTCATCGATGCCTTTGCCGAAGACGAACCGTGGCGGGCCGT8020.7911454839600679No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT7960.7852266898157281No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGATATCCGTTGTTAAGAGTCG4440.4379907666811348No Hit
GCTGCGTTCTTCATCGATGCCTAACCTGGAAGCTGCGTTCTTCATCGGCT4230.4172749871759461No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCATTGTTGAAAGTTT4080.4024780018150969No Hit
GCTGCGTTCTTCATCGAAACGGATATAACTACCATCTTTTCTTCTGGTCT4070.4014915361243736No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTG3650.360059977113996No Hit
GCTGCGTTCTTCATCGATGCCCTAACCTGGAAGCTGCGTTCTTCATCGGC3580.35315471727893305No Hit
GCTGCGTTCTTCATCGATGCCGAAGATCATGACCTCGGGCTAAGACGCCT3370.3324389377737442No Hit
GCTGCGTTCTTCATCGATGCGTGCGGCCTTAACATCCAGTATTCGACGCG3110.30679082981493905No Hit
GCTGCGTTCTTCATCGGCGCTTACTACCTAGGCATCCTTTGTGTGCCCTT2520.24858935406226573No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTG2440.2406976285364795No Hit
GCTGCGTTCTTCATCGATGCTGTCCATGGTCACGCGATGCTCTCCTCGAT2290.22590064317563036No Hit
GCTGCGTTCTTCATCGATGCCTGCGGATGCAATTGCCTCGACACTCGGGT1960.19334727538176222No Hit
GCTGCGTTCTTCATCGGTTCTTACTACCTAGGCATCCTTTGTGTGCCCTT1870.18446908416525273No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTGAAAGTTG1780.17559089294874325No Hit
GCTGCGTTCTTCATCGATGCCAGTTGGCGGGTGAACACTGTAATGTCTTC1730.17065856449512687No Hit
GCTGCGTTCTTCATCGGCGCAGTCCTTGTCATTTACTACAAACAAATTTC1620.1598074418971708No Hit
GCTGCGTTCTTCATCGATTTCACCCAACAATGCTTCAGGAGAAACGACAA1530.15092925068066135No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCGTTGTTGAAAGTTT1520.14994278498993804No Hit
GCTGCGTTCTTCATCGATGAAAGGCACTGGTAGGCCTAAGTGGACTTGAA1520.14994278498993804No Hit
GCTGCGTTCTTCATCGATGCTTCCTGCGTTAGCTTCGTACTGTTCCACTT1450.1430375251548751No Hit
GCTGCGTTCTTCATCGATGCCCCTTCCTTCCCATGCCTTAGCTTCCTCCT1400.13810519670125873No Hit
GCTGCGTTCTTCATCGATGCTTCATCATAGTCGCCATAACCATGAAGGCT1330.13119993686619577No Hit
GCTGCGTTCTTCATCGCTGTCAGATGCCTTGGCATCCTTCGTATGCCCTT1300.12824053979402597No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAAGCCGGACGATCTGGCAAACT1280.12626760841257942No Hit
GCTGCGTTCTTCATCGATGCGTTGATATTCCACTTCGCAAATCAAAATAA1220.12034881426823975No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTT1210.11936234857751647No Hit
GCTGCGTTCTTCATCGACTCTTACTACCAAGGCATCCTTTGTGTGCCCTT1200.1183758828867932No Hit
GCTGCGTTCTTCATCGATGCTAGAGCCGAGATATCCGTTGCCGAGAGTCG1130.11147062305173025No Hit
GCTGCGTTCTTCATCGATCGTCTTCCTTATTCTCAGACAAAATAAACTTC1100.10851122597956044No Hit
GCTGCGTTCTTCATCGATGCCGCGCGCGGAGAATGCACCGACACAGCAGC1090.10752476028883715No Hit
GCTGCGTTCTTCATCGATGCCTCCTACCTCATCTCTACGATCTCCGACAA1080.10653829459811388No Hit
GCTGCGTTCTTCATCGATGCCTCTTCCGAAGCCGGACGATCGGGCAAACT1070.1055518289073906No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCCGTTGCCGAGAGTCA1060.10456536321666733No Hit
GCTGCGTTCTTCATCGATGCCCAGCGTGAGCTGCATGATGACGAGCTTCT1030.10160596614449749No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)