FastQCFastQC Report
Sun 21 May 2023
EGAF00007833609

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007833609
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences115606
Sequences flagged as poor quality0
Sequence length247-250
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATC4399338.05425323945124No Hit
GGAAGTAAAAGTCGTAACAAGGACATTCAAAAGGGGAGCGCGCGGAAGTG1290711.164645433628012No Hit
GGAAGTAAAAGTCGTAACAAGGTCTCCGTTGGTGAACCAGCGGAGGGATC73706.375101638323271No Hit
GGAAGTAAAAGTCGTAACAAGGAACGAAGATGAAGGACACCTCTCCGGCA70106.063699115962839No Hit
GGAAGTAAAAGTCGTAACAAGGTCTCCGTAGGTGAACCTGCGGAGGGATC58725.0793211425012545No Hit
GGAAGTAAAAGTCGTAACAAGGAAGAAGTGAAATTCCTGAATAGACCAAT43323.747210352403854No Hit
GGAAGTAAAAGTCGTAACAAGGGCTGGCAGGGGCTGTGGGAGGAGTTTGT31642.736882168745567No Hit
GGAAGTAAAAGTCGTAACAAGGAAGAAGATAGTCCTGAAGTATCTCTTCA30182.610591145788281No Hit
GGAAGTAAAAGTCGTAACAAGGCAGGGTGGGAGGAGGTGCCAGGAATTTG19961.7265539850872793No Hit
GGAAGTAAAAGTCGTAACAAGGAAGAAGTGAAATTCCTGAATAGACCGAT19521.6884936767987822No Hit
GGAAGTAAAAGTCGTAACAAGGAAATGCGGATCCTCATGTTGGGCCTGGA18801.626213172326696No Hit
GGAAGTAAAAGTCGTAACAAGGAAAAGTGGGATAGTTTCTTCTTTGGAGA9390.8122415791567911No Hit
GGAAGTAAAAGTCGTAACAAGGGAGAGGGAGAGGACCTGGCCCAAGAAGG8800.7612061657699428No Hit
GGAAGTAAAAGTCGTAACAACACTAAATCTTATCTCCAGCCCTCAGAAGG8790.760341158763386No Hit
GGAAGTAAAAGTCGTAACAAAGTTTTGGTAGGTGAACCTGTGGAGGGATC6780.5864747504454786No Hit
GGAAGTAAAAGTCGTAACAAGGGCCAGCCAGGGAGAGGTCTCCCCAGGCC6730.5821497154126948No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCTGTAGGTGAACCTGCAGAAGGATC6260.5414943861045274No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTACCGGAAGGTGCGGCTGGATC6090.5267892669930626No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTATCGGAAGGTGCGGCTGGATC5700.49305399373734926No Hit
GGAAGTAAAAGTCGTAACAAGGCTTGATGCCTGGAAGTGGGGGCGAAGAA4960.4290434752521496No Hit
GGAAGTAAAAGTCGTAACAAGGCCAGACAGGAAGCGATCAACAAGATTCA4390.3797380758784146No Hit
GGAAGTAAAAGTCGTAACAAGGCCCACCAAATCGGGATATCGGCACTCAC4250.3676279777866201No Hit
GGAAGTAAAAGTCGTAACAAGAGCAGAAGGAATTCAGAAGAGCCAGGGTG4180.3615729287407228No Hit
GGAAGTAAAAGTCGTAACAAGGCAAAAATAGACAAGTGGGACTATATCAA3870.3347577115374634No Hit
GGAAGTAAAAGTCGTAACAAGGGCATGAGGATAAAAATGCATGACATTTG3840.3321626905177932No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCCATAGGTGAACCTGCGGAAGGATC3330.2880473331833988No Hit
GGAAGTAAAAGTCGTAACAAGGAAAGGCAGTCGGGGTACCAGTGCCCAGA3140.2716122000588205No Hit
GGAAGTAAAAGTCGTAACAAGGAGGCATTAATTATGAAAAAAACAGGCGA3090.2672871650260367No Hit
GGAAGTAAAAGTCGTAACAAGGTATCCGTACGGGAACGTGCGGATGGATC2990.2586370949604692No Hit
GGAAGTAAAAGTCGTAACAAGGAAGATATGAAAAGGGGCCAAAACCAAGG2900.2508520319014584No Hit
GGAAGTAAAAGTCGTAACAAGGAAAACAGTGAACAGCCTCAGTTCCCTGG2750.2378769268031071No Hit
GGAAGTAAAAGTCGTAACAAACAGGGAGTTGTGGTGGGAAGGAGCTTGCA2740.23701191979655034No Hit
GGAAGTAAAAGTCGTAACAAGGTGGGTAAGGAGCTCCTGGACGCGCTCCC2740.23701191979655034No Hit
GGAAGTAAAAGTCGTAACAAGGTGACTGTTGAGTGAATTTCTTATACAAA2440.21106170959984777No Hit
GGAAGTAAAAGTCGTAACAAGGGAAGGTAAAGGTTGCTCTCCATCTTGAG2220.1920315554555992No Hit
GGAAGTAAAAGTCGTAACAAGGAAGGAAGGTGGGGATGCGGAAGGGAGGA2070.1790564503572479No Hit
GGAAGTAAAAGTCGTAACAAGGAAAACGACATAAACTACTTGAGTACTAA2060.17819144335069115No Hit
GGAAGTAAAAGTCGTAACAAGGAGGAAGAAGGGTGGAGAGTCAGGACCAC2020.17473141532446412No Hit
GGAAGTAAAAGTCGTAACAAGGGAAGAGACAGAGAAGGCCATAGCATGGA1830.1582962821998858No Hit
GGAAGTAAAAGTCGTAACAAGGTCTCCGTTGGTGAACCAGCGGAGGGGTC1710.1479161981212048No Hit
GGAAGTAAAAGTCGTAACAAGCAGCTTGGTCCAGGGCGCCGCCCGAAGTG1580.136671107035967No Hit
GGAAGTAAAAGTCGTAACAAGGAGGAGGTGGCGTCTCTGAGGGCAAAGCT1420.12283099493105895No Hit
GGAAGTAAAAGTCGTAACAAGGAAGGAAGGAAGGAGGTGGGGACGGAGGG1340.11591093887860492No Hit
GGAAGTAAAAGTCGTAACAAGGTGGGCTATGGGGGTCTTGCAGTAGGTCT1290.11158590384582115No Hit
GGAAGTAAAAGTCGTAACTAAGAATGGGTTGCCTGCCAGCCCTGGCAGGT1280.1107208968392644No Hit
GGAAGTAAAAGTCGTAACAAGGTTATTAACGAAAGCTCTGACCACTGCTT1260.1089908828261509No Hit
GGAAGTAAAAGTCGTAACAAGGATAACGTGGAATTTGGGACTCAGCCAAC1240.1072608688130374No Hit
GGAAGTAAAAGTCGTAACAAGGAGGAAGCAGAAAAGCATGATGATAGCCC1230.10639586180648064No Hit
GGAAGTAAAAGTCGTAACAAGGAGAAAATCAAAACACGGGGAAACCGCTC1210.10466584779336711No Hit
GGAAGTAAAAGTCGTAACAAGGAGGGGGTGGCGTCTTCTGCGAGGTCAGT1170.1012058197671401No Hit
GGAAGTAAAAGTCGTAACAAGGGAAGGTTGTCATGCTACAGAGTGGTCCT1160.10034081276058336No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)