FastQCFastQC Report
Sun 21 May 2023
EGAF00007833615

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007833615
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences74900
Sequences flagged as poor quality0
Sequence length247-250
%GC52

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGAAGTAAAAGTCGTAACAAGGAACGAAGATGAAGGACACCTCTCCGGCA3119441.647530040053404No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATC2629835.11081441922563No Hit
GGAAGTAAAAGTCGTAACAAGGACATTCAAAAGGGGAGCGCGCGGAAGTG71979.608811748998665No Hit
GGAAGTAAAAGTCGTAACAAGGTCTCCGTTGGTGAACCAGCGGAGGGATC13941.8611481975967958No Hit
GGAAGTAAAAGTCGTAACAAGGGCTGGCAGGGGCTGTGGGAGGAGTTTGT8541.1401869158878504No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCTGTAGGTGAACCTGCAGAAGGATC6650.8878504672897197No Hit
GGAAGTAAAAGTCGTAACAAGGAAAGGCAGTCGGGGTACCAGTGCCCAGA4830.6448598130841121No Hit
GGAAGTAAAAGTCGTAACAAGGTATCCGTACGGGAACGTGCGGATGGATC4360.5821094793057411No Hit
GGAAGTAAAAGTCGTAACAAGGTCTCCGTAGGTGAACCTGCGGAGGGATC2800.3738317757009346No Hit
GGAAGTAAAAGTCGTAACAACACTAAATCTTATCTCCAGCCCTCAGAAGG2180.29105473965287054No Hit
GGAAGTAAAAGTCGTAACAAGGTATCAGTAGGTGAACCTGCTGATGGATC2170.28971962616822433No Hit
GGAAGTAAAAGTCGTAACAAGGAAGCTGAGTTTCGCCTCCCAGGCCCAGC2150.2870493991989319No Hit
GGAAGTAAAAGTCGTAACAAGGAAGAAGTGAAATTCCTGAATAGACCAAT1950.260347129506008No Hit
GGAAGTAAAAGTCGTAACAAGGAAGGAGCATATATGATTCAGCAGGAAAC1570.2096128170894526No Hit
GGAAGTAAAAGTCGTAACAAGGCGGTGAGCTGGCGCGACGAAGCCGCGCC1560.20827770360480638No Hit
GGAAGTAAAAGTCGTAACAAGGGCCAGCCAGGGAGAGGTCTCCCCAGGCC1440.19225634178905207No Hit
GGAAGTAAAAGTCGTAACAAGGATGCGACTGAATAACGTGGTCGATTAAC1390.1855807743658211No Hit
GGAAGTAAAAGTCGTAACAAGGAACGAAGATGAAGGACACCTTTCCGGCA1250.16688918558077437No Hit
GGAAGTAAAAGTCGTAACAAGGGAAGGTAAAGGTTGCTCTCCATCTTGAG1150.15353805073431243No Hit
GGAAGTAAAAGTCGTAACAAGGAGGATCTTAGCACATGCACATAGAAACA1050.14018691588785046No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTTAACCTGCGGAAGGATC830.11081441922563419No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)