FastQCFastQC Report
Sun 21 May 2023
EGAF00007833619

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007833619
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21026
Sequences flagged as poor quality0
Sequence length247-250
%GC42

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATC1084151.55997336630838No Hit
GGAAGTAAAAGTCGTAACAAGGTATCCGTACGGGAACGTGCGGATGGATC310114.748406734519168No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTACCGGAAGGTGCGGCTGGATC10374.931988966042043No Hit
GGAAGTAAAAGTCGTAACAAGGAACGAAGATGAAGGACACCTCTCCGGCA6723.1960429943879007No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTATCGGAAGGTGCGGCTGGATC6653.1627508798630264No Hit
GGAAGTAAAAGTCGTAACAAGGAAGGAGCATATATGATTCAGCAGGAAAC5422.577760867497384No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTAGGGGAACCTGCGGCTGGATC4392.0878911823456674No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCTGTAGGTGAACCTGCAGAAGGATC2141.017787501189004No Hit
GGAAGTAAAAGTCGTAACAAGGTCTCCGTTGGTGAACCAGCGGAGGGATC1910.9083991248929897No Hit
GGAAGTAAAAGTCGTAACAAGGAGGGGATCGTCGGCGGGTGCGGCCTTTC1640.7799866831541901No Hit
GGAAGTAAAAGTCGTAACAAGGCCCACCAAATCGGGATATCGGCACTTAC1190.5659659469228574No Hit
GGAAGTAAAAGTCGTAACAAGGTCTCCGTAGGTGAACCTGCGGAGGGATC1150.5469418814800723No Hit
GGAAGTAAAAGTCGTAACAAGGAAAGAAAACAGAATCCGAAAAGAGCACA1050.49938171787310953No Hit
GGAAGTAAAAGTCGTAACAAGGCTCAAGTTGAAAAACGCTTGAACCAAGT940.44706553790545034No Hit
GGAAGTAAAAGTCGTAACAAGGAGGTGGGAGAAAGCTACATTGTCTTCGT930.4423095215447541No Hit
GGAAGTAAAAGTCGTAACAAGGTGGCGAGGTTGTCCCACAATCGGATTTC850.4042613906591839No Hit
GGAAGTAAAAGTCGTAACAAGGAGGAAGTAGGCCAAGTTGAGCAGGATAT670.31865309616665083No Hit
GGAAGTAAAAGTCGTAACAAGGACATTCAAAAGGGGAGCGCGCGGAAGTG620.2948730143631694No Hit
GGAAGTAAAAGTCGTAACAAGGTATCCGTACCGGAAGGTGCGGATGGATC520.2473128507562066No Hit
GGAAGTAAAAGTCGTAACAAGGGGGGAGGGAGAGGCGGATGGTGTTGATC460.21877675259202892No Hit
GGAAGTAAAAGTCGTAACAAGGAGAGCAGAGGAAAGAAACACCTTAATCC460.21877675259202892No Hit
GGAAGTAAAAGTCGTAACAAGGACTACAGAAAGAAACAGGGTCACAGACA450.21402073623133264No Hit
GGAAGTAAAAGTCGTAACAAGGGGCTGAGCGAGAGCATGGACACGGTCAC440.20926471987063633No Hit
GGAAGTAAAAGTCGTAACAAGGATAACGTGGAATTTGGGACTCAGCCAAC420.1997526871492438No Hit
GGAAGTAAAAGTCGTAACAAGGTATCAGTAGGTGAACCTGCTGATGGATC410.19499667078854752No Hit
GGAAGTAAAAGTCGTAACAAGGATGTTGCGTTAAGGTTTCGGATAAAGCA410.19499667078854752No Hit
GGAAGTAAAAGTCGTAACCAAGTTAAAACCCTGCCGCGTATGCAAACAAA390.18548463806715496No Hit
GGAAGTAAAAGTCGTAACAAGGCATGGTTACGATGCGCCAGGACGGCTAC390.18548463806715496No Hit
GGAAGTAAAAGTCGTAACAAGGTGGGCTATGGGGGTCTTGCAGTAGGTCT370.1759726053457624No Hit
GGAAGTAAAAGTCGTAACAAGAGCAGAAGGAATTCAGAAGAGCCAGGGTG360.17121658898506611No Hit
GGAAGTAAAAGTCGTAACAAGGCCCACCAAATCGGGATATCGGCACTCAC350.1664605726243698No Hit
GGAAGTAAAAGTCGTAACAAGGGAAAGAAGGTTATCATCTTCAAGTACAA350.1664605726243698No Hit
GGAAGTAAAAGTCGTAACAAGGGCGACGAAGAGCATGAGGATCTGAACGA340.16170455626367355No Hit
GGAAGTAAAAGTCGTAACAAGGATGTTGCGTCAAGGTTTCGGATAAAGCA320.152192523542281No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACATGCGGAAGGATC320.152192523542281No Hit
GGAAGTAAAAGTCGTAACAAGGTTCCAGACCGAAGAGATAGAGCTGCGAT250.11890040901740703No Hit
GGAAGTAAAAGTCGTAACAAGGCACGGCGCAAGAGCGGAGAAATACGGCC250.11890040901740703No Hit
GGAAGTAAAAGTCGTAACAAGGGAGAAAACGGTGAATGTGAGCGAAGAAG250.11890040901740703No Hit
GGAAGTAAAAGTCGTAACAAGGATGTTGCGTTAAGTTTTCAAATAGGGTG240.11414439265671074No Hit
GGAAGTAAAAGTCGTAACAAGGTATCCGTAGGTGAACCTGCGGAAGGATC230.10938837629601446No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)