FastQCFastQC Report
Sun 21 May 2023
EGAF00007833622

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007833622
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences32847
Sequences flagged as poor quality0
Sequence length235-238
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG766423.332420007915484No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT756323.024933783907205No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAAGCCGGACGATCGGGCAAACT461314.043900508417817No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG21696.603342771029317No Hit
GCTGCGTTCTTCATCGACTCTTACTACCTAGGCATCCTTTGTGTGCCCTT6271.9088501232989312No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCGTTGTTGAAAGTTT6101.8570950162876367No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT5261.6013638992906507No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGGGCAAACT4901.4917648491490851No Hit
GCTGCGTTCTTCATCGATGCCGTTTCCGAGGCCGGACGATCGGGCAAACT4201.2786555849849301No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTG4021.2238560599141473No Hit
GCTGCGTTCTTCATCGATGCCTTTGCCGAAGACGAACCGTGGCGGGCCGT3911.19036746125978No Hit
GCTGCGTTCTTCATCGATGCACGAGCCGAGTGATCCACCGCTAAGAGTCG3871.1781897890218285No Hit
GCTGCGTTCTTCATCGATGTCCCCCTCTGCCTGCTGCGTCTTCTCCACCT3741.1386123542484854No Hit
GCTGCGTTCTTCATCGATGCCTATCACACCATTTAAGATGTTTTCCTGTG3441.0472798124638476No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCCGTTGCCGAGAGTCA2940.8950589094894511No Hit
GCTGCGTTCTTCATCGATGGGAGAACCAAGAGATCCGTTGTCGAAAGTTG2590.7885042774073736No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTGAAAGTTG1970.599750357719122No Hit
GCTGCGTTCTTCATCGATGCCACCATCGCGCTGGGTCCGCGCTGGCGAGC1740.5297287423508996No Hit
GCTGCGTTCTTCATCGATGCTGTCGTCGTGACGGTGGCCGCGGCGCTGGG1600.4871068895180687No Hit
GCTGCGTTCTTCATCGATGCGATAAAGGTTGGCATCATGTTTAATGGGTG1540.4688403811611411No Hit
GCTGCGTTCTTCATCGATGCCATCTGGCCATGGTTGAGGAGGGTGGGAGC1530.4657959631016531No Hit
GCTGCGTTCTTCATCGATGCCCCTTCCTTCCCATGCCTTAGCTTCCTCCT1280.3896855116144549No Hit
GCTGCGTTCTTCATCGATGCAGAACCAAGAGATCCGTTGTTGAAAGTTTT1140.3470636587816239No Hit
GCTGCGTTCTTCATCGGCGCTTACTACCTAGGCATCCTTTGTGTGCCCTT1110.3379304046031601No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTG1000.3044418059487929No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTCGAAAGTTG950.28921971565135324No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTT880.2679087892349377No Hit
GCTGCGTTCTTCATCGATGCTCTGGAACATTCCGCCAAGTCATTCCCCCT830.25268669893749807No Hit
GCTGCGTTCTTCATCGATGCCGGGAGGGGACCCAGGCCTGGCCGCGGAAG780.23746460864005844No Hit
GCTGCGTTCTTCATCGATGCATATGTGGTGTGGCCCACATTTCTGTATGC780.23746460864005844No Hit
GCTGCGTTCTTCATCGATGCCAGGCAAAAACAGGAACAACACACACGTGT750.22833135446159464No Hit
GCTGCGTTCTTCATCGATGCTCTCGGCAAAGGCACTCGCCTCGGCCCGGA700.213109264164155No Hit
GCTGCGTTCTTCATCGATGCCAGGCAAACAAAGGAACAACACACATGTGT690.2100648461046671No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTA680.20702042804517914No Hit
TCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT640.19484275580722746No Hit
GCTGCGTTCTTCATCGGTTCTTACTACCTAGGCATCCTTTGTGTGCCCTT620.1887539196882516No Hit
TCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG620.1887539196882516No Hit
GCTGCGTTCTTCATCGATGCCCGCATGCCTGTTCGTCGCTACGAGGTGCT580.17657624745029987No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATCAAAATAA550.1674429932718361No Hit
GCTGCGTTCTTCATCGATGCGCACACTACTCCCACCGCCCCCGAGTGCCT550.1674429932718361No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTA500.15222090297439644No Hit
GCTGCGTTCTTCATCGATGCGGTCCAAGGTCTGCTGCGTTCTTCATCGAT480.14613206685542057No Hit
GCTGCGTTCTTCATCGAAACGGATATAGCTACCATCTTTTCTTCTGGTCT470.14308764879593266No Hit
GCTGCGTTCTTCATCGATGCACACATGGGGGCCACGTCAGGTGACCACTC450.13699881267695682No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTAAAAGTTT450.13699881267695682No Hit
GCTGCGTTCTTCATCGATGCTCATCAGGGATATTGGCCTAAAATTTTCTT410.1248211404390051No Hit
GCTGCGTTCTTCATCGATGCGTAGACAGACGAAGCACAGCCAAGTAGCAG410.1248211404390051No Hit
GCTGCGTTCTTCATCGATGCCCTTGTGGCCACCCCCTGACATGACTCCTT390.11873230432002922No Hit
GCTGCGTTCTTCATCGATGCGAGGAGTGCATTCCACATGCCCAGGTGCCG380.1156878862605413No Hit
GCTGCGTTCTTCATCGATGCGATAAAGGTTGGCATCGTGTTTAATGGGTG370.11264346820105336No Hit
GCTGCGTTCTTCATCGATGCCGAGCCAGAAGTGATGGTTTTAGTGGGGAA360.10959905014156544No Hit
GCTGCGTTCTTCATCGACCCAACCTTCGACCTTGTCTCTCTCTACACCCA360.10959905014156544No Hit
GCTGCGTTCTTCATCGATGCGGCGCAGGAACTCCGTGTACGAGACCTCTT360.10959905014156544No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTAAAAGTTG350.1065546320820775No Hit
GCTGCGTTCTTCATCGATGCCAGGCAAACAAAGGAACAACACATGCGTGT330.10046579596310165No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCATTGTTAAAAGTTT330.10046579596310165No Hit
GCTGCGTTCTTCATCGATGCCGGTGAATTATGCGATGGTGGTGGCGGCGG330.10046579596310165No Hit
GCTGCGTTCTTCATCGATGCCGAGCGAAGTGTCGGCGGCGACGATGGCGG330.10046579596310165No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)