FastQCFastQC Report
Sun 21 May 2023
EGAF00007833626

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007833626
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences63834
Sequences flagged as poor quality0
Sequence length235-238
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGCCGCTTCCGAAGCCGGACGATCGGGCAAACT2055432.199141523326126No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATCAAAATAA1318120.648870507879813No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG927614.531440924898956No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGGGCAAACT32675.1179622144938435No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT28414.4506062599868415No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCGTTGTTGAAAGTTT18262.8605445373938654No Hit
GCTGCGTTCTTCATCGATGCCATCCGCGACGAATAAGTCCACTGCTGCCG9281.453770717799292No Hit
GCTGCGTTCTTCATCGACTCTTACTACCTAGGCATCCTTTGTGTGCCCTT7151.1200927405457906No Hit
GCTGCGTTCTTCATCGATGCAGGTATCGAGCATGCCCTCAAGGCCTTCGA5260.8240122818560642No Hit
GCTGCGTTCTTCATCGATGCTGGCTCCAGGGAGCTTCTTGATGAGGTCAG5220.8177460287621017No Hit
GCTGCGTTCTTCATCGATGCGGGATCGATGGGGCGCGTGCGAGCCTGTGG4200.6579565748660589No Hit
GCTGCGTTCTTCATCGATGCAGCTGTCGGTAAGCTGCGTTCTTCATCGAT3950.6187924930287935No Hit
GCTGCGTTCTTCATCGATGCCAGTTGGCGGGTGAACACTGTAATGTCTTC3160.49503399442303475No Hit
GCTGCGTTCTTCATCGATGTGTTTTGGCAATGGCAACTGGACCAAAATCC2870.4496036594918069No Hit
GCTGCGTTCTTCATCGATGCCGTTTCCGAGGCCGGACGATCGGGCAAACT2860.4480370962183162No Hit
GCTGCGTTCTTCATCGCAGCTTCGACAGTGAAGCAGTTCAGGTCGACAAT2560.4010401980135978No Hit
GCTGCGTTCTTCATCGATGCTGTTTAATTTTTCAAGAACGAGTTCGTAAT2520.39477394491963536No Hit
GCTGCGTTCTTCATCGATGCCAGTTGGCGGGTAAACACTGTAATGTCTTC2380.3728420590907667No Hit
GCTGCGTTCTTCATCGATGCGTTTTTGTTCTCTGTTTTTTTCTTTACGCT1920.30078014851019835No Hit
GCTGCGTTCTTCATCGAAACGGATATAACTACCATCTTTTCTTCTGGTCT1670.2616160666729329No Hit
GCTGCGTTCTTCATCGATGCGCTGGGCTATCCCTTCTGCCGTGGCCGTCT1510.23655105429708306No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGTGATCCATTGCTTAAAGTTG1420.22245198483566753No Hit
GCTGCGTTCTTCATCGATGCCGGTAACGTCTGGCTCCTTCGTCCCGATGA1420.22245198483566753No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTCCACTTCGCAAATCAAAATAA1350.21148604192123321No Hit
GCTGCGTTCTTCATCGAAACGGATATAGCTACCATCTTTTCTTCTGGTCT1320.20678635210076135No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCCGTTGCCGAGAGTCA1220.1911207193658552No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCTTTGCCGAGAGTCG1110.1738885233574584No Hit
GCTGCGTTCTTCATCGATGCGCGCGGGAAAGTTATATAGAATAATCGGCA1090.1707553968104772No Hit
GCTGCGTTCTTCATCGATAAAGTCGAGAGAAATTTGCTCCTGTCCGAGGT990.155089764075571No Hit
GCTGCGTTCTTCATCGATGCAGCTGTCGGTAAGCTGCGTTCTTCATCGGC970.1519566375285898No Hit
GCTGCGTTCTTCATCGATGCCAAATATACCGCCGTATCTATACTCCCCCC920.1441238211611367No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTGAAAGTTG910.1425572578876461No Hit
GCTGCGTTCTTCATCGATGCTTCTGAGAATTTCTCGGCTTCTACGGGAGC810.1268916251527399No Hit
GCTGCGTTCTTCATCGATGCAGAGCTTGACGTCACGCGGGCAGATCATAC810.1268916251527399No Hit
GCTGCGTTCTTCATCGATGCGCCCCCAGGCCTGTTTGACGATCAGGCCGT800.1253250618792493No Hit
GCTGCGTTCTTCATCGATAAAGTCGAGAGAAATTTGCGCCTGTCCGAGGT790.12375849860575869No Hit
GCTGCGTTCTTCATCGGCGCTTACTACCTAGGCATCCTTTGTGTGCCCTT760.11905880878528685No Hit
GCTGCGTTCTTCATCGATGTCGCTTCCGAAGCCGGACGATCGGGCAAACT730.11435911896481499No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAAGCCGGACGATCGGACAAACT690.10809286587085254No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTAAAAGTTG660.10339317605038068No Hit
GCTGCGTTCTTCATCGATGGGAGAACCAAGAGATCCGTTGTCGAAAGTTG640.10026004950339945No Hit
GCTGCGTTCTTCATCGATGAGCTGTCGGTAAGCTGCGTTCTTCATCGATG640.10026004950339945No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)