FastQCFastQC Report
Sun 21 May 2023
EGAF00007833631

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007833631
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences102217
Sequences flagged as poor quality0
Sequence length247-250
%GC52

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATC6059259.277810931645426No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTACCGGAAGGTGCGGCTGGATC64896.348259095845115No Hit
GGAAGTAAAAGTCGTAACAAGGACATTCAAAAGGGGAGCGCGCGGAAGTG49284.821115861353786No Hit
GGAAGTAAAAGTCGTAACAAGGTCTCCGTTGGTGAACCAGCGGAGGGATC33503.277341342438146No Hit
GGAAGTAAAAGTCGTAACAAGGTCTCCGTAGGTGAACCTGCGGAGGGATC25762.520128745707661No Hit
GGAAGTAAAAGTCGTAACAAGGTACGGACGCATCGATGAAGAACGCAGCC23552.303922048191592No Hit
GGAAGTAAAAGTCGTAACAAGGCAGCAGTCTTGCCCTGAACATGGTTTCC13141.2855004549145446No Hit
GGAAGTAAAAGTCGTAACAAGGTATCCGTACGGGAACGTGCGGATGGATC12541.2268018040052044No Hit
GGAAGTAAAAGTCGTAACAAGTGGGGGCGGGAACCCCCGGGCGCCTGTGG11241.0996213937016348No Hit
GGAAGTAAAAGTCGTAACAAGGATAACGTGGAATTTGGGACTCAGCCAAC10120.9900505786708669No Hit
GGAAGTAAAAGTCGTAACAAGGGCTGGCAGGGGCTGTGGGAGGAGTTTGT10010.9792891593374878No Hit
GGAAGTAAAAGTCGTAACAAGAGCAGAAGGAATTCAGAAGAGCCAGGGTG9610.9401567253979279No Hit
GGAAGTAAAAGTCGTAACAAGGTAGAGAAAATGAAGAAATAAAGGTTGGT8400.821781112730759No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTAGGGGAACCTGCGGCTGGATC7640.7474294882455952No Hit
GGAAGTAAAAGTCGTAACAAGGAAGAAGTGAAATTCCTGAATAGACCAAT7590.7425379340031502No Hit
GGAAGTAAAAGTCGTAACAACACTAAATCTTATCTCCAGCCCTCAGAAGG6430.6290538755784263No Hit
GGAAGTAAAAGTCGTAACAAGGAAGTGAGGAGAGTTATTGTGGAAGTGGT5350.5233963039416144No Hit
GGAAGTAAAAGTCGTAACAAGGCATCGATGAAGAACGCAGCCAAGGTACG5050.4940469784869444No Hit
GGAAGTAAAAGTCGTAACAAGGAAAAGTGGGATAGTTTCTTCTTTGGAGA4830.47252413982018643No Hit
GGAAGTAAAAGTCGTAACAAACAGGGAGTTGTGGTGGGAAGGAGCTTGCA4720.4617627204868075No Hit
GGAAGTAAAAGTCGTAACAAGGTAAGCAAGTCAGGCAAAACCAAGTAACG4410.4314350841836485No Hit
GGAAGTAAAAGTCGTAACAAGGAAAACAGTGAACAGCCTCAGTTCCCTGG4050.39621589363804455No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTATCGGAAGGTGCGGCTGGATC3420.33458231018323764No Hit
GGAAGTAAAAGTCGTAACAAGGAAGAAGATAGTCCTGAAGTATCTCTTCA3310.32382089084985866No Hit
GGAAGTAAAAGTCGTAACAAGGGCAGAAGGAATTCAGAAGAGCCAGGGTG2860.2797969026678537No Hit
GGAAGTAAAAGTCGTAACAAGGTAGAGATAATGAAGAAACAAAGGTTGGT2850.2788185918193647No Hit
GGAAGTAAAAGTCGTAACAAGGGAAAGAGTTGAAGATTGAAGGTTGATAG2560.2504475772131837No Hit
GGAAGTAAAAGTCGTAACAAGGAACTTAGCGACTTGCTGCGTGAGATAGA2450.23968615787980474No Hit
GGAAGTAAAAGTCGTAACAAGGCAGGGTGGGAGGAGGTGCCAGGAATTTG2160.21131514327362377No Hit
GGAAGTAAAAGTCGTAACAAGGTACGGACATGAAGAACGCAGCCAAGGTA2040.19957541309175578No Hit
GGAAGTAAAAGTCGTAACAAGGAACGAAGATGAAGGACACCTCTCCGGCA1930.1888139937583768No Hit
GGAAGTAAAAGTCGTAACAAGGTACGGACCATCGATGAAGAACGCAGCCA1860.1819658178189538No Hit
GGAAGTAAAAGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATC1790.1751176418795308No Hit
GGAAGTAAAAGTCGTAACAAGGACCTTCAAAAGGGGAGCGCGCGGAAGTG1660.16239960084917382No Hit
GGAAGTAAAAGTCGTAACAAGGAAAGTGGCATAGATGGTGATAACTTGTA1610.15750804660672882No Hit
GGAAGTAAAAGTCGTAACAAGGTACGGATGAAGAACGCAGCCAAGGTACG1550.15163818151579483No Hit
GGAAGTAAAAGTCGTAACAAGGTACGGACCGATGAAGAACGCAGCCAAGG1470.14381169472788286No Hit
GGAAGTAAAAGTCGTAACAAGGCAGGGCTACCAAAGCTCCTCCCTCTTCA1350.13207196454601486No Hit
GGAAGTAAAAGTCGTAACAAGGTGGTAAATGGAGGAGTTGGGATTCAAAC1300.12718041030356986No Hit
GGAAGTAAAAGTCGTAACAAGGGAAGGTTGTCATGCTACAGAGTGGTCCT1210.11837561266716888No Hit
GGAAGTAAAAGTCGTAACAAGGTACGGACGAAGAACGCAGCCAAGGTACG1160.11348405842472387No Hit
GGAAGTAAAAGTCGTAACAAGGCAAAAATAGACAAGTGGGACTATATCAA1150.11250574757623487No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)